RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 NDRG2Q9UN36 371 aaKnown RBP10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 IFT52Q9Y366 437 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 ENPP4Q9Y6X5 453 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 IGKV1-8A0A0C4DH67 115 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 SNPHO15079 494 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 ASNA1O43681 348 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 GADD45GO95257 159 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 KLK1P06870 262 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 STSP08842 583 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 FURINP09958 794 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 ARAFP10398 606 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 AK4P27144 223 aaPredicted RBP10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 AQP1P29972 269 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 PCYT1AP49585 367 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 RAB28P51157 221 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 HBA1P69905 142 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 KRT33BQ14525 404 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 SMAD2Q15796 467 aaKnown RBP10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 UAP1L1Q3KQV9 507 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 COLEC12Q5KU26 742 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 MEDAGQ5VYS4 303 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 ANGPTL8Q6UXH0 198 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 MMP21Q8N119 569 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 OR4K1Q8NGD4 311 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 OR52E1Q8NGJ3 308 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 CCL4L1Q8NHW4 92 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 UTP15Q8TED0 518 aaKnown RBP10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 JPH3Q8WXH2 748 aaPredicted RBP10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 OR1E3Q8WZA6 343 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 RMI1Q9H9A7 625 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 C3orf14Q9HBI5 128 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 WASH6PQ9NQA3 447 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 ACER3Q9NUN7 267 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 AHSPQ9NZD4 102 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 SPATA7Q9P0W8 599 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 TBC1D29Q9UFV1 150 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 BDP1A6H8Y1 2624 aa10.44□□□□□ -0.74
SH3RF1-203ENST00000508685 CCRL2O00421 344 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 RTCAO00442 366 aaKnown RBP10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 PLPP1O14494 284 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 DSCR3O14972 297 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 TBX1O43435 398 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 OXSR1O95747 527 aaPredicted RBP10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 IFNW1P05000 195 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 ETFAP13804 333 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 IL9P15248 144 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 CBLP22681 906 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 UQCRC2P22695 453 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 HOXD12P35452 270 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 CHI3L1P36222 383 aaPredicted RBP10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 HSD17B2P37059 387 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 CRISP1P54107 249 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 PCBP3P57721 371 aaKnown RBP10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 TAS2R50P59544 299 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 COPZ1P61923 177 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 RHAGQ02094 409 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 EEF1A2Q05639 463 aaKnown RBP10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 C2orf80Q0P641 193 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 MAPK11Q15759 364 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 RNLSQ5VYX0 342 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 STEAP3Q658P3 488 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 FAM71E1Q6IPT2 247 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 FAM180BQ6P0A1 224 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 ENPP7Q6UWV6 458 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 ADCK2Q7Z695 626 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 CCDC103Q8IW40 242 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 KRT78Q8N1N4 520 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 METTL4Q8N3J2 472 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 PARP16Q8N5Y8 322 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 FAM46DQ8NEK8 389 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 OR2A1Q8NGT9 310 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 NFKBIDQ8NI38 313 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 FAM3CQ92520 227 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 TSACCQ96A04 125 aaPredicted RBP10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 SCARF2Q96GP6 870 aaPredicted RBP10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 BMFQ96LC9 184 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 TRNT1Q96Q11 434 aaKnown RBP10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 MS4A12Q9NXJ0 267 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 GPR83Q9NYM4 423 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 MMP17Q9ULZ9 603 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 ICKQ9UPZ9 632 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 TRAPPC4Q9Y296 219 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 ANKDD1BA6NHY2 528 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 ZAR1LA6NP61 321 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 PDE9AO76083 593 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 C6orf47O95873 294 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 DLGAP3O95886 979 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 ADAP00813 363 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 HOXB3P14651 431 aaPredicted RBP10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 CHMP24386 653 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 CCR8P51685 355 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 SMIM11AP58511 58 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 SNRPGP62308 76 aaKnown RBP10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 SELENBP1Q13228 472 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 PTGES3Q15185 160 aaKnown RBP10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 RPE65Q16518 533 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 EOGTQ5NDL2 527 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 DEPDC1Q5TB30 811 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 PLAG1Q6DJT9 500 aa10.43□□□□□ -0.74
SH3RF1-203ENST00000508685 PTCHD4Q6ZW05 846 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms