RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 RWDD1Q9H446 243 aaPredicted RBP4.07□□□□□ -1.76
GYPA-205ENST00000508337 HMG20BQ9P0W2 317 aa4.07□□□□□ -1.76
GYPA-205ENST00000508337 ABCD2Q9UBJ2 740 aa4.07□□□□□ -1.76
GYPA-205ENST00000508337 TSPAN16Q9UKR8 245 aa4.07□□□□□ -1.76
GYPA-205ENST00000508337 EXOC6BQ9Y2D4 811 aa4.07□□□□□ -1.76
GYPA-205ENST00000508337 CAB39Q9Y376 341 aaPredicted RBP4.07□□□□□ -1.76
GYPA-205ENST00000508337 TMED5Q9Y3A6 229 aa4.07□□□□□ -1.76
GYPA-205ENST00000508337 N6AMT1Q9Y5N5 214 aa4.07□□□□□ -1.76
GYPA-205ENST00000508337 OR5H15A6NDH6 313 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 M0QX08 132 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 TTI1O43156 1089 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 ANPEPP15144 967 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 GJB2P29033 226 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 ID1P41134 155 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 ACAA2P42765 397 aaKnown RBP4.06□□□□□ -1.76
GYPA-205ENST00000508337 MTIF2P46199 727 aaKnown RBP4.06□□□□□ -1.76
GYPA-205ENST00000508337 SNU13P55769 128 aaKnown RBP4.06□□□□□ -1.76
GYPA-205ENST00000508337 STARD6P59095 220 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 GMFBP60983 142 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 ACTR1AP61163 376 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 RPS27AP62979 156 aaKnown RBP4.06□□□□□ -1.76
GYPA-205ENST00000508337 SNX1Q13596 522 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 ZNF506Q5JVG8 444 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 C9orf66Q5T8R8 295 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 LIPJQ5W064 366 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 LEMD1Q68G75 181 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 NEPROQ6NW34 567 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 UNC5CLQ8IV45 518 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 LRRC43Q8N309 656 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 SFRP1Q8N474 314 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 RTL3Q8N8U3 475 aaKnown RBP4.06□□□□□ -1.76
GYPA-205ENST00000508337 DRAXINQ8NBI3 349 aaPredicted RBP4.06□□□□□ -1.76
GYPA-205ENST00000508337 CCDC110Q8TBZ0 833 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 SSC4DQ8WTU2 575 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 COG3Q96JB2 828 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 CCDC28BQ9BUN5 200 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 NT5C3AQ9H0P0 336 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 RNPEPL1Q9HAU8 725 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 CUTCQ9NTM9 273 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 NMRK1Q9NWW6 199 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 EIF3KQ9UBQ5 218 aaKnown RBP4.06□□□□□ -1.76
GYPA-205ENST00000508337 CLIP2Q9UDT6 1046 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 TEKT2Q9UIF3 430 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 LEF1Q9UJU2 399 aaPredicted RBP4.06□□□□□ -1.76
GYPA-205ENST00000508337 ZNF346Q9UL40 294 aaKnown RBP4.06□□□□□ -1.76
GYPA-205ENST00000508337 ERVK-19Q9WJR5 959 aa4.06□□□□□ -1.76
GYPA-205ENST00000508337 NIP7Q9Y221 180 aaKnown RBP eCLIP4.06□□□□□ -1.76
GYPA-205ENST00000508337 TEX48A0A1B0GUV7 120 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 SMIM30A4D0T7 59 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 CTAGE15A4D2H0 777 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 BCL2L11O43521 198 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 SYT7O43581 403 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 KIAA0513O60268 411 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 NEMFO60524 1076 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 ANXA9O76027 345 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 SLC16A8O95907 504 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 PAHP00439 452 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 OR9G9P0C7N8 305 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 HSD17B1P14061 328 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 ARF4P18085 180 aaPredicted RBP4.05□□□□□ -1.76
GYPA-205ENST00000508337 IL10P22301 178 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 ALDH3B1P43353 468 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 MAGEB1P43366 347 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 CRMP1Q14194 572 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 MXD4Q14582 209 aaPredicted RBP4.05□□□□□ -1.76
GYPA-205ENST00000508337 PDK1Q15118 436 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 TYSND1Q2T9J0 566 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 POM121L1PQ3SYA9 428 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 CCDC40Q4G0X9 1142 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 IFI44LQ53G44 452 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 REP15Q6BDI9 236 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 ETFRF1Q6IPR1 90 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 SLC25A24Q6NUK1 477 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 NUFIP2Q7Z417 695 aaKnown RBP4.05□□□□□ -1.76
GYPA-205ENST00000508337 SH2D6Q7Z4S9 175 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 CTAGE6Q86UF2 777 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 SIAH3Q8IW03 269 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 FGFRL1Q8N441 504 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 PDCL2Q8N4E4 241 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 SAMD12Q8N8I0 201 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 ZPLD1Q8TCW7 415 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 CD99L2Q8TCZ2 262 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 AGAP11Q8TF27 550 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 NABP1Q96AH0 204 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 ESAMQ96AP7 390 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 FAM111AQ96PZ2 611 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 SLC39A3Q9BRY0 314 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 YY1AP1Q9H869 796 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 ELL3Q9HB65 397 aaPredicted RBP4.05□□□□□ -1.76
GYPA-205ENST00000508337 HOMER3Q9NSC5 361 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 EXTL2Q9UBQ6 330 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 IL19Q9UHD0 177 aa4.05□□□□□ -1.76
GYPA-205ENST00000508337 SPAG9O60271 1321 aaKnown RBP4.04□□□□□ -1.76
GYPA-205ENST00000508337 A0A087X0K7 114 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 P2RX6O15547 441 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 LRRTM2O43300 516 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 VEGFDO43915 354 aa4.04□□□□□ -1.76
GYPA-205ENST00000508337 DUSP11O75319 330 aaKnown RBP4.04□□□□□ -1.76
GYPA-205ENST00000508337 SRSF10O75494 262 aaKnown RBP4.04□□□□□ -1.76
GYPA-205ENST00000508337 TRIM16O95361 564 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms