RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 CASP9P55211 416 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 FOXL2P58012 376 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 IGLV3-21P80748 117 aaPredicted RBP16.36■□□□□ 0.21
RNF4-209ENST00000507784 RHAGQ02094 409 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 LIPEQ05469 1076 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 BIKQ13323 160 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 TP53BP2Q13625 1128 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 NKG7Q16617 165 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 SAMD4BQ5PRF9 694 aaKnown RBP16.36■□□□□ 0.21
RNF4-209ENST00000507784 FAM111BQ6SJ93 734 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 ULK2Q8IYT8 1036 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 FBXW8Q8N3Y1 598 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 FKBP10Q96AY3 582 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 ELP4Q96EB1 424 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 FAM120BQ96EK7 910 aaKnown RBP16.36■□□□□ 0.21
RNF4-209ENST00000507784 TMEM121BQ9BXQ6 578 aaPredicted RBP16.36■□□□□ 0.21
RNF4-209ENST00000507784 TRIM4Q9C037 500 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 VN1R1Q9GZP7 353 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 MMADHCQ9H3L0 296 aaPredicted RBP16.36■□□□□ 0.21
RNF4-209ENST00000507784 ZCCHC3Q9NUD5 404 aaKnown RBP16.36■□□□□ 0.21
RNF4-209ENST00000507784 FOXJ2Q9P0K8 574 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 PADI1Q9ULC6 663 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 NEUROG3Q9Y4Z2 214 aa16.36■□□□□ 0.21
RNF4-209ENST00000507784 IGLV3-12A0A075B6K2 115 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 CIB2O75838 187 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 ALBP02768 609 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 ATP1B1P05026 303 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 ME2P23368 584 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 SOX11P35716 441 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 STT3AP46977 705 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 EMP2P54851 167 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 EEFSECP57772 596 aaKnown RBP16.35■□□□□ 0.21
RNF4-209ENST00000507784 MRPS35P82673 323 aaKnown RBP16.35■□□□□ 0.21
RNF4-209ENST00000507784 CEACAM7Q14002 265 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 NSDHLQ15738 373 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 DGAT2L6Q6ZPD8 337 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 MED25Q71SY5 747 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 TMPRSS7Q7RTY8 843 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 C6orf120Q7Z4R8 191 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 HPS6Q86YV9 775 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 ST13P4Q8IZP2 240 aaPredicted RBP16.35■□□□□ 0.21
RNF4-209ENST00000507784 PLPP5Q8NEB5 264 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 NUP43Q8NFH3 380 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 OR10A6Q8NH74 314 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 RIT1Q92963 219 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 MOAP1Q96BY2 351 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 PELOQ9BRX2 385 aaKnown RBP16.35■□□□□ 0.21
RNF4-209ENST00000507784 RAD21L1Q9H4I0 556 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 IKZF5Q9H5V7 419 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 ANKRA2Q9H9E1 313 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 POLR1BQ9H9Y6 1135 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 GMPR2Q9P2T1 348 aaKnown RBP16.35■□□□□ 0.21
RNF4-209ENST00000507784 ABCD2Q9UBJ2 740 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 CORO2BQ9UQ03 480 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 AP3M1Q9Y2T2 418 aa16.35■□□□□ 0.21
RNF4-209ENST00000507784 VSTM2BA6NLU5 285 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 SORBS2O94875 1100 aaKnown RBP16.34■□□□□ 0.21
RNF4-209ENST00000507784 DLGAP3O95886 979 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 RECKO95980 971 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 SLC5A2P31639 672 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 MSX2P35548 267 aaPredicted RBP16.34■□□□□ 0.21
RNF4-209ENST00000507784 CRATP43155 626 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 PGDP52209 483 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 PRR5P85299 388 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 PRICKLE4Q2TBC4 344 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 TRMT12Q53H54 448 aaKnown RBP16.34■□□□□ 0.21
RNF4-209ENST00000507784 ZNF628Q5EBL2 1059 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 PIGGQ5H8A4 983 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.34■□□□□ 0.21
RNF4-209ENST00000507784 MRPL14Q6P1L8 145 aaKnown RBP16.34■□□□□ 0.21
RNF4-209ENST00000507784 TMEM64Q6YI46 380 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 TIPARPQ7Z3E1 657 aaKnown RBP16.34■□□□□ 0.21
RNF4-209ENST00000507784 RNF130Q86XS8 419 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 TMEM151BQ8IW70 566 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 GALNT12Q8IXK2 581 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 FAM156AQ8NDB6 213 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 C7orf57Q8NEG2 295 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 OR7G2Q8NG99 324 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 OR56A1Q8NGH5 318 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 PSMA8Q8TAA3 256 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 SFXN5Q8TD22 340 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 METTL21AQ8WXB1 218 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 UTP4Q969X6 686 aaKnown RBP16.34■□□□□ 0.21
RNF4-209ENST00000507784 SLC35G5Q96KT7 338 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 KCTD14Q9BQ13 255 aaPredicted RBP16.34■□□□□ 0.21
RNF4-209ENST00000507784 CRB3Q9BUF7 120 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 DDX18Q9NVP1 670 aaKnown RBP16.34■□□□□ 0.21
RNF4-209ENST00000507784 BCAP29Q9UHQ4 241 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 C3orf18Q9UK00 162 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 PCDHGA8Q9Y5G5 932 aa16.34■□□□□ 0.21
RNF4-209ENST00000507784 SEC16AO15027 2179 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 FAM186AA6NE01 2351 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 IDSB3KWA1 339 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 CNOT3O75175 753 aaKnown RBP16.33■□□□□ 0.2
RNF4-209ENST00000507784 ALOX12BO75342 701 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 CT62P0C5K7 136 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 GSK3BP49841 420 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 OR4D2P58180 307 aa16.33■□□□□ 0.2
RNF4-209ENST00000507784 ZNF267Q14586 743 aaPredicted RBP16.33■□□□□ 0.2
RNF4-209ENST00000507784 SAXO2Q658L1 398 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms