RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 RASA2Q15283 850 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 CDSNQ15517 529 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 ZNF630Q2M218 657 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 SGO1Q5FBB7 561 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 TCHHL1Q5QJ38 904 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 CCNYL2Q5T2Q4 361 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 SLC48A1Q6P1K1 146 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 ARHGAP11AQ6P4F7 1023 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 RNF111Q6ZNA4 994 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 GK5Q6ZS86 529 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 NCCRP1Q6ZVX7 275 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 SLC22A9Q8IVM8 553 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 GALNT12Q8IXK2 581 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 GSPT2Q8IYD1 628 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 ZNF615Q8N8J6 731 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 OR4K14Q8NGD5 310 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 SLC22A8Q8TCC7 542 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 DOK4Q8TEW6 326 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 CHTF18Q8WVB6 975 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 SELENOMQ8WWX9 145 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 RIT1Q92963 219 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 TM4SF18Q96CE8 201 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 C11orf24Q96F05 449 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 CNPPD1Q9BV87 410 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 IL1RL2Q9HB29 575 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 PROK2Q9HC23 129 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 SACM1LQ9NTJ5 587 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 EMCNQ9ULC0 261 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 SLC12A4Q9UP95 1085 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 PCDHA9Q9Y5H5 950 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 HRH3Q9Y5N1 445 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 CHCHD2Q9Y6H1 151 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 CRYBG3Q68DQ2 2970 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 CREBBPQ92793 2442 aa8.37□□□□□ -1.07
PDLIM5-209ENST00000506632 A0A1B0GVC2 190 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 A0A1W2PPM1 405 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 C1orf226A1L170 272 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 FAM166BA8MTA8 275 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 G3V2L1 256 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 GOLGA8RI6L899 631 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 CDC40O60508 579 aaKnown RBP eCLIP8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 GUCY1B2O75343 617 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 SUPT7LO94864 414 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 KRT6AP02538 564 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 KRT6BP04259 564 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 SHBGP04278 402 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 P04436 131 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 ATP1B1P05026 303 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 CPMP14384 443 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 CHN1P15882 459 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 PORP16435 677 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 HTR1EP28566 365 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 SSTR4P31391 388 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 PIGAP37287 484 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 KRT6CP48668 564 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 DNASE1L1P49184 302 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 XKP51811 444 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 SMSP52788 366 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 MAPK12P53778 367 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 PPIAP62937 165 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 TRA2BP62995 288 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 PLGLB1Q02325 96 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 MGAT2Q10469 447 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 CSTF3Q12996 717 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 LCP2Q13094 533 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 NTRK2Q16620 822 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 EMC4Q5J8M3 183 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 TEX35Q5T0J7 233 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 SLC22A10Q63ZE4 541 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 C3P1Q6ZMU1 363 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 FAM47EQ6ZV65 393 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 GPRIN3Q6ZVF9 776 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 SLC29A4Q7RTT9 530 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 CD163Q86VB7 1156 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 SLC22A16Q86VW1 577 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 TDRPQ86YL5 185 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 DND1Q8IYX4 353 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 MMP21Q8N119 569 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 FBXW8Q8N3Y1 598 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 FAM109AQ8N4B1 249 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 TMEM251Q8N6I4 163 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 C1orf52Q8N6N3 182 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 CDYL2Q8N8U2 506 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 ACBD4Q8NC06 268 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 C17orf47Q8NEP4 570 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 ADIPOR1Q96A54 375 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 TP53INP1Q96A56 240 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 MARVELD3Q96A59 401 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 NTNG2Q96CW9 530 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 TRIM44Q96DX7 344 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 HBEGFQ99075 208 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 ACPTQ9BZG2 426 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 DEFB127Q9H1M4 99 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 GSTO2Q9H4Y5 243 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 CHST11Q9NPF2 352 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 NMRK1Q9NWW6 199 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 TUBA8Q9NY65 449 aaPredicted RBP8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 VPS29Q9UBQ0 182 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 TBK1Q9UHD2 729 aa8.36□□□□□ -1.07
PDLIM5-209ENST00000506632 DCDC2Q9UHG0 476 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms