RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 GALNTL6Q49A17 601 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 ZNF227Q86WZ6 799 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 GALNT12Q8IXK2 581 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 CISD2Q8N5K1 135 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 EXOSC8Q96B26 276 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 SNRNP40Q96DI7 357 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 EGLN2Q96KS0 407 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 ART5Q96L15 291 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 HES7Q9BYE0 225 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 TRIM45Q9H8W5 580 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 NKIRAS1Q9NYS0 192 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 MYOTQ9UBF9 498 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 RAP2CQ9Y3L5 183 aa16.93■□□□□ 0.3
PDLIM7-216ENST00000506537 RELNP78509 3460 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 ATP6AP2A0A1C7CYW4 349 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 J3QKU1 62 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 WWP2O00308 870 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 FCHO1O14526 889 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 DYRK3O43781 588 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 ZNF354AO60765 605 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 PRAMEF2O60811 474 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 ATP6AP2O75787 350 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 OR2J2O76002 312 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 CSNK2A2P19784 350 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 S1PR1P21453 382 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 NT5EP21589 574 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 C2orf80Q0P641 193 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 FUT7Q11130 342 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 PDCD2Q16342 344 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 PRICKLE4Q2TBC4 344 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 SPINK14Q6IE38 97 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 FAM111BQ6SJ93 734 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 HOMEZQ8IX15 550 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 LRRC25Q8N386 305 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 CCT7Q99832 543 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 MAT2BQ9NZL9 334 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 EHD3Q9NZN3 535 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 PSME2Q9UL46 239 aa16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-216ENST00000506537 SNNO75324 88 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 HLCSP50747 726 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 OC90Q02509 493 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 DUSP8Q13202 625 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 EBPQ15125 230 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 CEBPEQ15744 281 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 ZNF766Q5HY98 468 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 RPUSD3Q6P087 351 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 RNF111Q6ZNA4 994 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 IKBIPQ70UQ0 350 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 TICAM1Q8IUC6 712 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 ZNF615Q8N8J6 731 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 SIMC1Q8NDZ2 872 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 ADCY4Q8NFM4 1077 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 CLHC1Q8NHS4 586 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 SUN3Q8TAQ9 357 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 NUBPLQ8TB37 319 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 SCMH1Q96GD3 660 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 PPP3R2Q96LZ3 170 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 TAAR6Q96RI8 345 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 RASL10BQ96S79 203 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 BARD1Q99728 777 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 SLC35C2Q9NQQ7 365 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 ASF1BQ9NVP2 202 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 LRFN1Q9P244 771 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 YARS2Q9Y2Z4 477 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 TMED5Q9Y3A6 229 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 ZNF780BQ9Y6R6 833 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 CROCCQ5TZA2 2017 aa16.91■□□□□ 0.3
PDLIM7-216ENST00000506537 CDK2AP1O14519 115 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 PEX11AO75192 247 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 SNUPNO95149 360 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 BCKDHAP12694 445 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 CYB561P49447 251 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 RPL14P50914 215 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 SSR4P51571 173 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 MAP4K2Q12851 820 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 C6orf136Q5SQH8 315 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 CCDC116Q8IYX3 515 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 VWA5B2Q8N398 1253 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 GFM2Q969S9 779 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 CTHRC1Q96CG8 243 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 TSSK3Q96PN8 268 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 BRINP2Q9C0B6 783 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 WWTR1Q9GZV5 400 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 PFDN4Q9NQP4 134 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 KLHL1Q9NR64 748 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 PNPOQ9NVS9 261 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 BAIAP2L1Q9UHR4 511 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 ZNF639Q9UID6 485 aa16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 WBP11Q9Y2W2 641 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-216ENST00000506537 MYO18BQ8IUG5 2567 aa16.89■□□□□ 0.3
PDLIM7-216ENST00000506537 SLC25A12O75746 678 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 OR6B1O95007 311 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 NADKO95544 446 aaPredicted RBP16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 CBX7O95931 251 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 PCSK2P16519 638 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 SOX3P41225 446 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 MRPS35P82673 323 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 PMP22Q01453 160 aa16.89■□□□□ 0.29
PDLIM7-216ENST00000506537 EXOSC7Q15024 291 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms