RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ZNF544Q6NX49 715 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 TRIM40Q6P9F5 258 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 FAM111BQ6SJ93 734 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 SCIMPQ6UWF3 145 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 ADAMTSL5Q6ZMM2 481 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 Q6ZSR9 355 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 LUZP1Q86V48 1076 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 CARM1Q86X55 608 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 CNGA4Q8IV77 575 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 MCOLN2Q8IZK6 566 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 FBXL14Q8N1E6 418 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 MORN4Q8NDC4 146 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 ZNF540Q8NDQ6 660 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 FAM13CQ8NE31 585 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 STEAP2Q8NFT2 490 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 OR6K3Q8NGY3 331 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 CLDND2Q8NHS1 167 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 GABPB2Q8TAK5 448 aaPredicted RBP2.93□□□□□ -1.94
TCOF1-208ENST00000506063 SPPL2AQ8TCT8 520 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 SLC2A12Q8TD20 617 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 ZNF837Q96EG3 531 aaPredicted RBP2.93□□□□□ -1.94
TCOF1-208ENST00000506063 SMIM10Q96HG1 83 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 TMEM41AQ96HV5 264 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 PRAP1Q96NZ9 151 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 DGAT2Q96PD7 388 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 C19orf43Q9BQ61 176 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 LPAR2Q9HBW0 351 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 HAUS2Q9NVX0 235 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 C1RLQ9NZP8 487 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 SPATA7Q9P0W8 599 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 IMPACTQ9P2X3 320 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 RPUSD1Q9UJJ7 312 aaKnown RBP2.93□□□□□ -1.94
TCOF1-208ENST00000506063 GRIP1Q9Y3R0 1128 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 MMACHCQ9Y4U1 282 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.93□□□□□ -1.945e-7■■■□□ 17.1
TCOF1-208ENST00000506063 CORINQ9Y5Q5 1042 aa2.93□□□□□ -1.94
TCOF1-208ENST00000506063 TRAV20A0A0B4J274 112 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 MYOCOSA0A1B0GUC4 107 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 CLPSL1A2RUU4 121 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 IQCF5A8MTL0 148 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 TMCO5BA8MYB1 307 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 H0YL77 283 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 MYO1CO00159 1063 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 HRKO00198 91 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 GNB5O14775 395 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 DHHO43323 396 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 NRDCO43847 1150 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 ZIC3O60481 467 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 SNX4O95219 450 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 NTN1O95631 604 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 CLPSP04118 112 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 RPN2P04844 631 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 FAM157BP0CG42 384 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 GAAP10253 952 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 RNH1P13489 461 aaKnown RBP2.92□□□□□ -1.94
TCOF1-208ENST00000506063 ALOX12P18054 663 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 PSMA3P25788 255 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 MC4RP32245 332 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 FOXN2P32314 431 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 GPC1P35052 558 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 CASP3P42574 277 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 KLK7P49862 253 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 FABP6P51161 128 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 FBXW4P57775 412 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 LMO4P61968 165 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 RPS15AP62244 130 aaKnown RBP2.92□□□□□ -1.94
TCOF1-208ENST00000506063 CD69Q07108 199 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 WASHC5Q12768 1159 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 GBX1Q14549 363 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 ITIH4Q14624 930 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 HERC3Q15034 1050 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 PON3Q15166 354 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 BCL2A1Q16548 175 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 CARTPTQ16568 116 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 C2orf68Q2NKX9 166 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 BOLA3Q53S33 107 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 ODF2Q5BJF6 829 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 DMRTC1Q5HYR2 192 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 KLF17Q5JT82 389 aaPredicted RBP2.92□□□□□ -1.94
TCOF1-208ENST00000506063 SFRP5Q5T4F7 317 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 SAXO2Q658L1 398 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 DESI1Q6ICB0 168 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 FAHD2BQ6P2I3 314 aaPredicted RBP2.92□□□□□ -1.94
TCOF1-208ENST00000506063 C16orf87Q6PH81 154 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 UGT2A3Q6UWM9 527 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 TMEM64Q6YI46 380 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 SLCO4C1Q6ZQN7 724 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 SPATC1Q76KD6 591 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 P4HA3Q7Z4N8 544 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 ASPGQ86U10 573 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 DND1Q8IYX4 353 aaKnown RBP2.92□□□□□ -1.94
TCOF1-208ENST00000506063 CA13Q8N1Q1 262 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 TXLNBQ8N3L3 684 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 SLC15A4Q8N697 577 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 PLD5Q8N7P1 536 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 TC2NQ8N9U0 490 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 WDSUB1Q8N9V3 476 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 CAMKVQ8NCB2 501 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 RNF214Q8ND24 703 aa2.92□□□□□ -1.94
TCOF1-208ENST00000506063 PPFIBP2Q8ND30 876 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms