RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TMEM245Q9H330 911 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 DCTPP1Q9H773 170 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 Q9HAA7 133 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 ELL3Q9HB65 397 aaPredicted RBP3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 ZNF581Q9P0T4 197 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 HMG20BQ9P0W2 317 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 SEC14L4Q9UDX3 406 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 NARFQ9UHQ1 456 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 TDRKHQ9Y2W6 561 aaKnown RBP3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 TEX264Q9Y6I9 313 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 RAD54L2Q9Y4B4 1467 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 TP53BP1Q12888 1972 aaPredicted RBP3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 FOXI3A8MTJ6 420 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 CHEK1O14757 476 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 SH2D1BO14796 132 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 FCGR3AP08637 254 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 HSD17B1P14061 328 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 ZNF18P17022 549 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 HLA-DPA1P20036 260 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 PPP2R1BP30154 601 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 MATKP42679 507 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 TNFRSF4P43489 277 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 CDKL1Q00532 357 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 AP1B1Q10567 949 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 KLF5Q13887 457 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 ABRAXAS2Q15018 415 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 TCHHL1Q5QJ38 904 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 NKAIN2Q5VXU1 208 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 SEL1L3Q68CR1 1132 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 RHBDD2Q6NTF9 364 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 TYMSOSQ8TAI1 123 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 ATP6V0A1Q93050 837 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 SLCO4A1Q96BD0 722 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 TRPV6Q9H1D0 765 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 RNF41Q9H4P4 317 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 DHRS4-AS1Q9P1J3 65 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 ARMCX1Q9P291 453 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 ERVK-18Q9QC07 812 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 COPS7AQ9UBW8 275 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 IKZF3Q9UKT9 509 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 SLC6A5Q9Y345 797 aa3.13□□□□□ -1.91
TOPBP1-204ENST00000505804 TRIM64A6NGJ6 449 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 TRIM64BA6NI03 449 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 DDX39AO00148 427 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 E2F3O00716 465 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 MCF2LO15068 1137 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 LRRTM2O43300 516 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 ZNF354AO60765 605 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 HSF2BPO75031 334 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 OAS1P00973 400 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 PDGFBP01127 241 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 SERPINF2P08697 491 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 HIST1H2AGP0C0S8 130 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 HMGCLP35914 325 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 BRCC3P46736 316 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 CSRP3P50461 194 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 HNRNPFP52597 415 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 SLC12A3P55017 1021 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 NLRP11P59045 1033 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 CCZ1BP86790 482 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 CCZ1P86791 482 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 UBXN1Q04323 297 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 PPP1R8Q12972 351 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 TSTA3Q13630 321 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 CRMP1Q14194 572 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 C17orf58Q2M2W7 97 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 CMPK2Q5EBM0 449 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 HIST2H2AA3Q6FI13 130 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 ABRAXAS1Q6UWZ7 409 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 GPR142Q7Z601 462 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 MARCH9Q86YJ5 346 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 PEX5LQ8IYB4 626 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 NEK11Q8NG66 645 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 AGAP11Q8TF27 550 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 P3H4Q92791 437 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 HIST1H2ACQ93077 130 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 EEF2KMTQ96G04 330 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 NAP1L3Q99457 506 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 TEX13AQ9BXU3 409 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 RSPH9Q9H1X1 276 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 ADGRL4Q9HBW9 690 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 PRMT8Q9NR22 394 aaPredicted RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 CLEC5AQ9NY25 188 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 TUBGCP4Q9UGJ1 667 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 FAM153AQ9UHL3 310 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 TRMT6Q9UJA5 497 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 APPL1Q9UKG1 709 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 ABCC9O60706 1549 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 AFF2P51816 1311 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 NPC1L1Q9UHC9 1359 aa3.12□□□□□ -1.91
TOPBP1-204ENST00000505804 PTPRUQ92729 1446 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 SYCE3A1L190 88 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 TRIM49BA6NDI0 452 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 NME2P1O60361 137 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 SRPX2O60687 465 aaPredicted RBP3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 ABHD2P08910 425 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 NDST1P52848 882 aa3.11□□□□□ -1.91
TOPBP1-204ENST00000505804 CLPPQ16740 277 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms