RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 RPL10LQ96L21 214 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF778Q96MU6 729 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SORCS2Q96PQ0 1159 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 KCTD15Q96SI1 283 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF670Q9BS34 389 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 QRSL1Q9H0R6 528 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 OR51V1Q9H2C8 321 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 IPPKQ9H8X2 491 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 C11orf16Q9NQ32 467 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 LHX9Q9NQ69 397 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 BIN3Q9NQY0 253 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 OSER1Q9NX31 292 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 FLRT1Q9NZU1 646 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF221Q9UK13 617 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CA14Q9ULX7 337 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ASF1AQ9Y294 204 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 TLR6Q9Y2C9 796 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SMCHD1A6NHR9 2005 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 NUP210LQ5VU65 1888 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 UPK3BL1B0FP48 263 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 UPK3BL2E5RIL1 263 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 DHX15O43143 795 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 XPNPEP2O43895 674 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 CPNE3O75131 537 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 KHDRBS3O75525 346 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 UGT2B17O75795 530 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 APOL3O95236 402 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TBX18O95935 607 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 OTCP00480 354 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 GUSBP08236 651 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PRPS2P11908 318 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 NR2C1P13056 603 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 C4BPBP20851 252 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 CD52P31358 61 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 GDNFP39905 211 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ETV4P43268 484 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 GATMP50440 423 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ANXA11P50995 505 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 POLR2JP52435 117 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 AGFG1P52594 562 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 UGT2B15P54855 530 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 MANFP55145 182 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC18A2Q05940 514 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ELAVL2Q12926 359 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 HABP2Q14520 560 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PTPRCAPQ14761 206 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 CLCA4Q14CN2 919 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 KCNA10Q16322 511 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 MPEG1Q2M385 716 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 MLIPQ5VWP3 458 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 REP15Q6BDI9 236 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 MAVSQ7Z434 540 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TMPRSS11BQ86T26 416 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF227Q86WZ6 799 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PGAM4Q8N0Y7 254 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 UBR7Q8N806 425 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PDPRQ8NCN5 879 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 C9orf43Q8TAL5 461 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 NSMAFQ92636 917 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 APBB2Q92870 758 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 NKD1Q969G9 470 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 MYDGFQ969H8 173 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 LRIG1Q96JA1 1093 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TEX37Q96LM6 180 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PPP3R2Q96LZ3 170 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 FRMD6Q96NE9 622 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TEFMQ96QE5 360 aaKnown RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 OR2A14Q96R47 310 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SMOQ99835 787 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 FNDC11Q9BVV2 318 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 JAM3Q9BX67 310 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 BARHL1Q9BZE3 327 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 HAPLN2Q9GZV7 340 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 DNTTIP1Q9H147 329 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 FOLH1BQ9HBA9 442 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PAK1IP1Q9NWT1 392 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SLCO1C1Q9NYB5 712 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 AHSPQ9NZD4 102 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 WRAP73Q9P2S5 460 aaPredicted RBP3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 GALPQ9UBC7 116 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 MTRRQ9UBK8 725 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 STOML2Q9UJZ1 356 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 PDE10AQ9Y233 779 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 SPACA6W5XKT8 324 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 DOCK3Q8IZD9 2030 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 UNC13CQ8NB66 2214 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 HTTP42858 3142 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TEX13CA0A0J9YWL9 993 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ABHD14A-ACY1A0A1B0GW23 586 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ELOVL7A1L3X0 281 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 MYBPHLA2RUH7 354 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 METTL21EPA6NDL7 271 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 BTNL10A8MVZ5 291 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ISM1B1AKI9 464 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF195O14628 629 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 INPPL1O15357 1258 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 DPM1O60762 260 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 TBL1XO60907 577 aa3.5□□□□□ -1.85
PCDH11X-208ENST00000504220 MTX2O75431 263 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms