RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 SIRT3Q9NTG7 399 aaPredicted RBP19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 IL17BQ9UHF5 180 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 SNX8Q9Y5X2 465 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 SYNDIG1LA6NDD5 238 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 A8MUA0 341 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 ANP32DO95626 131 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 PTPN6P29350 595 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 NUDT2P50583 147 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 OR4D2P58180 307 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 MRPS35P82673 323 aaKnown RBP19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 FAM111BQ6SJ93 734 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 PTPMT1Q8WUK0 201 aaPredicted RBP19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 KIAA1143Q96AT1 154 aaPredicted RBP19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 ELP4Q96EB1 424 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 GPN2Q9H9Y4 310 aaPredicted RBP19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 CXorf21Q9HAI6 301 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 ADAP2Q9NPF8 381 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 PCDHB14Q9Y5E9 798 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 PCDHGA6Q9Y5G7 932 aa19.07■□□□□ 0.64
CDC42SE2-206ENST00000503291 A0A096LPI6 279 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 IGHV3-20A0A0C4DH32 117 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 ERN1O75460 977 aaKnown RBP19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 GALNSP34059 522 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 SOX18P35713 384 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 MGAT2Q10469 447 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 ART3Q13508 389 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 SSPNQ14714 243 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 ELAVL1Q15717 326 aaKnown RBP19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 ZNF628Q5EBL2 1059 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 LRIF1Q5T3J3 769 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 TMEM107Q6UX40 140 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 GALNT12Q8IXK2 581 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 FBXO27Q8NI29 283 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 FGF11Q92914 225 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 C8orf44Q96CB5 159 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 MAT2BQ9NZL9 334 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 MRPS18BQ9Y676 258 aaKnown RBP19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 CLCA3PQ9Y6N3 262 aa19.06■□□□□ 0.64
CDC42SE2-206ENST00000503291 B2RBV5 119 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 C17orf105B2RV13 164 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 CT62P0C5K7 136 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 MMP11P24347 488 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 MAP4K2Q12851 820 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 GTDC1Q4AE62 458 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 TRMT12Q53H54 448 aaKnown RBP19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 SFT2D3Q587I9 215 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 CPEB2Q7Z5Q1 589 aaKnown RBP19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 DHDDSQ86SQ9 333 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 CLEC4FQ8N1N0 589 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 DNAJB8Q8NHS0 232 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 ZNF675Q8TD23 568 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 CTHRC1Q96CG8 243 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 LRRC58Q96CX6 371 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 MAGED4Q96JG8 741 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 PHF12Q96QT6 1004 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 ANKRA2Q9H9E1 313 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 GID8Q9NWU2 228 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 VAPAQ9P0L0 249 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 C19orf25Q9UFG5 118 aaPredicted RBP19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 VPS4AQ9UN37 437 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 HS3ST3B1Q9Y662 390 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 PLOD2O00469 737 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 NPPAP01160 153 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 IGHEP01854 428 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 MC3RP41968 323 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 PGDP52209 483 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 TRMT5Q32P41 509 aaKnown RBP19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 OR7G2Q8NG99 324 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 ROPN1LQ96C74 230 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 SLC39A3Q9BRY0 314 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 SLC25A37Q9NYZ2 338 aa19.05■□□□□ 0.64
CDC42SE2-206ENST00000503291 CEP295Q9C0D2 2601 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 UNC5CO95185 931 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 ZCCHC18P0CG32 403 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 LIFP15018 202 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 HOXB9P17482 250 aaPredicted RBP19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 SOAT1P35610 550 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 CCT3P49368 545 aaKnown RBP19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 MXRA7P84157 204 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 CLN3Q13286 438 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 GAB1Q13480 694 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 CAPRIN1Q14444 709 aaKnown RBP19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 ZNF267Q14586 743 aaPredicted RBP19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 CCDC121Q6ZUS5 278 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 MSRB3Q8IXL7 192 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 VWA5B2Q8N398 1253 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 TRIML2Q8N7C3 387 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 SIMC1Q8NDZ2 872 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 OR5AK3PQ8NH89 298 aa19.04■□□□□ 0.64
CDC42SE2-206ENST00000503291 LOC102723996A0A087X1L8 192 aa19.03■□□□□ 0.64
CDC42SE2-206ENST00000503291 FXYD1O00168 92 aa19.03■□□□□ 0.64
CDC42SE2-206ENST00000503291 HRKO00198 91 aa19.03■□□□□ 0.64
CDC42SE2-206ENST00000503291 PCDH17O14917 1159 aa19.03■□□□□ 0.64
CDC42SE2-206ENST00000503291 SLITRK5O94991 958 aa19.03■□□□□ 0.64
CDC42SE2-206ENST00000503291 KRT16P08779 473 aa19.03■□□□□ 0.64
CDC42SE2-206ENST00000503291 UQCRC2P22695 453 aa19.03■□□□□ 0.64
CDC42SE2-206ENST00000503291 OTX2P32243 289 aa19.03■□□□□ 0.64
CDC42SE2-206ENST00000503291 SPRED3Q2MJR0 410 aa19.03■□□□□ 0.64
CDC42SE2-206ENST00000503291 KIRREL2Q6UWL6 708 aa19.03■□□□□ 0.64
CDC42SE2-206ENST00000503291 RINLQ6ZS11 566 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms