RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 FAM71CQ8NEG0 241 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 OR56B1Q8NGI3 324 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 OR1K1Q8NGR3 316 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 NPRL2Q8WTW4 380 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 PHYHIPQ92561 330 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 P3H4Q92791 437 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 PNPLA2Q96AD5 504 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 CAPNS2Q96L46 248 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 JPH2Q9BR39 696 aaPredicted RBP3.33□□□□□ -1.88
SMC4-225ENST00000497203 DCTPP1Q9H773 170 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 SLC25A19Q9HC21 320 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 CNOT2Q9NZN8 540 aaKnown RBP3.33□□□□□ -1.88
SMC4-225ENST00000497203 EIF3KQ9UBQ5 218 aaKnown RBP3.33□□□□□ -1.88
SMC4-225ENST00000497203 LHX3Q9UBR4 397 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 CLIP2Q9UDT6 1046 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 TUBGCP4Q9UGJ1 667 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 CIDEBQ9UHD4 219 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 RARRES3Q9UL19 164 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 SLC6A5Q9Y345 797 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 AUP1Q9Y679 476 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 CLCA3PQ9Y6N3 262 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 NPC1L1Q9UHC9 1359 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 FER1L5A0AVI2 2057 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 IGLV4-3A0A075B6K6 122 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 RNF212BA8MTL3 300 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 ZNF724A8MTY0 619 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 ARHGEF33A8MVX0 844 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 ZNF749O43361 778 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 GHRP10912 638 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 SELEP16581 610 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 DNAJB1P25685 340 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 CHRNA3P32297 505 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 HSPA1LP34931 641 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 ID1P41134 155 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 CD86P42081 329 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 CAMLGP49069 296 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 NPY2RP49146 381 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 RPS4XP62701 263 aaKnown RBP3.32□□□□□ -1.88
SMC4-225ENST00000497203 RPS27AP62979 156 aaKnown RBP3.32□□□□□ -1.88
SMC4-225ENST00000497203 DPYSQ14117 519 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 LY6DQ14210 128 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 PDIA5Q14554 519 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 CLPPQ16740 277 aaPredicted RBP3.32□□□□□ -1.88
SMC4-225ENST00000497203 AGKQ53H12 422 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 STEAP1BQ6NZ63 245 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 METTL7BQ6UX53 244 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 ZNF497Q6ZNH5 498 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 CATSPER4Q7RTX7 472 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 SYVN1Q86TM6 617 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 CATSPER3Q86XQ3 398 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 BEST4Q8NFU0 473 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 OR1B1Q8NGR6 318 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 CCDC110Q8TBZ0 833 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 TBC1D31Q96DN5 1066 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 RCHY1Q96PM5 261 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 ACCSQ96QU6 501 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 ATF6BQ99941 703 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 C19orf43Q9BQ61 176 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 OCR1Q9BZK8 76 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 PANK3Q9H999 370 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 NGBQ9NPG2 151 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 SOHLH2Q9NX45 425 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 TAS2R3Q9NYW6 316 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 MUTYHQ9UIF7 546 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 ZNF490Q9ULM2 529 aaPredicted RBP3.32□□□□□ -1.88
SMC4-225ENST00000497203 ISY1Q9ULR0 285 aaKnown RBP3.32□□□□□ -1.88
SMC4-225ENST00000497203 MGAT4AQ9UM21 535 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 ZNF175Q9Y473 711 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 AFF2P51816 1311 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 PTPRUQ92729 1446 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 RAD54L2Q9Y4B4 1467 aa3.32□□□□□ -1.88
SMC4-225ENST00000497203 TRGV8A0A0C4DH27 118 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 TRBV5-4A0A0C4DH59 114 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 A0A1B0GU03 582 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 DUSP11O75319 330 aaKnown RBP3.31□□□□□ -1.88
SMC4-225ENST00000497203 POP4O95707 220 aaKnown RBP3.31□□□□□ -1.88
SMC4-225ENST00000497203 IGHG1P01857 330 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 CALML3P27482 149 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 PRDX6P30041 224 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 OXTRP30559 389 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 GPC3P51654 580 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 TKTL1P51854 596 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 GSTO1P78417 241 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 HTD2P86397 168 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 GABPB1Q06547 395 aaPredicted RBP3.31□□□□□ -1.88
SMC4-225ENST00000497203 EMC2Q15006 297 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 KARSQ15046 597 aaKnown RBP3.31□□□□□ -1.88
SMC4-225ENST00000497203 HKDC1Q2TB90 917 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 POM121L1PQ3SYA9 428 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 HSP90AA5PQ58FG0 334 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 UNC5DQ6UXZ4 953 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 DPY19L2P2Q6ZN68 376 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 TMEM26Q6ZUK4 368 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 GET4Q7L5D6 327 aaPredicted RBP3.31□□□□□ -1.88
SMC4-225ENST00000497203 NUFIP2Q7Z417 695 aaKnown RBP3.31□□□□□ -1.88
SMC4-225ENST00000497203 GOLGA7Q7Z5G4 137 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 ADGRD2Q7Z7M1 963 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 RANBP3LQ86VV4 465 aaPredicted RBP3.31□□□□□ -1.88
SMC4-225ENST00000497203 PHC2Q8IXK0 858 aa3.31□□□□□ -1.88
SMC4-225ENST00000497203 LMNTD2Q8IXW0 634 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms