RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 ZFYP08048 801 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-212ENST00000496458 FERP16591 822 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 ADSSP30520 456 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 ATXN3P54252 364 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-212ENST00000496458 GMFBP60983 142 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 RBBP4Q09028 425 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 TEFQ10587 303 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 HSP90AA5PQ58FG0 334 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 C12orf60Q5U649 245 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 HOOK3Q86VS8 718 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 EGFL6Q8IUX8 553 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 KLHL30-AS1Q8NEE0 82 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 OR13C5Q8NGS8 318 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 ITLN1Q8WWA0 313 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 GIMAP1Q8WWP7 306 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 LIPHQ8WWY8 451 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 SLC35C1Q96A29 364 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 FAM111AQ96PZ2 611 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 PRMT1Q99873 361 aaKnown RBP4.3□□□□□ -1.72
SF3B1-212ENST00000496458 TRIM7Q9C029 511 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 SLC5A7Q9GZV3 580 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 ABCG8Q9H221 673 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 SP140LQ9H930 580 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 THYN1Q9P016 225 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 AURKCQ9UQB9 309 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 RPH3AQ9Y2J0 694 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-212ENST00000496458 PTPN23Q9H3S7 1636 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 HECW2Q9P2P5 1572 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 CCDC141Q6ZP82 1450 aa4.3□□□□□ -1.72
SF3B1-212ENST00000496458 SIGLEC1Q9BZZ2 1709 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 ABCA6Q8N139 1617 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 DIP2CQ9Y2E4 1556 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 LOC390937A0A1W2PQ73 354 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 IGLON5A6NGN9 336 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 UBXN8O00124 270 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 FBP2O00757 339 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 IFIT3O14879 490 aaKnown RBP4.29□□□□□ -1.72
SF3B1-212ENST00000496458 B4GAT1O43505 415 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 SCO2O43819 266 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 REC8O95072 547 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 SEMA4FO95754 770 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 KRT3P12035 628 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 ELK3P41970 407 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 RABIFP47224 123 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 IFNAR2P48551 515 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 HNMTP50135 292 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 ASIC1P78348 528 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 PDK1Q15118 436 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 RPS6KA1Q15418 735 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 RFTN2Q52LD8 501 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-212ENST00000496458 ZNF506Q5JVG8 444 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 TMEM270Q6UE05 265 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 BAIAP2L2Q6UXY1 529 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 RGS9BPQ6ZS82 235 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 LPCAT2Q7L5N7 544 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 ZBED8Q8IZ13 594 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 CD177Q8N6Q3 437 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 OR52K2Q8NGK3 314 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 OR1B1Q8NGR6 318 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 KIAA1524Q8TCG1 905 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-212ENST00000496458 CTNNBL1Q8WYA6 563 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-212ENST00000496458 RUFY1Q96T51 708 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 TXN2Q99757 166 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 TCHPQ9BT92 498 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 UBE2TQ9NPD8 197 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-212ENST00000496458 CLEC5AQ9NY25 188 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 CNIH4Q9P003 139 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 VSIG4Q9Y279 399 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 HBS1LQ9Y450 684 aaKnown RBP4.29□□□□□ -1.72
SF3B1-212ENST00000496458 ATP7AQ04656 1500 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 C9orf84Q5VXU9 1444 aa4.29□□□□□ -1.72
SF3B1-212ENST00000496458 ATP8B3O60423 1300 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 OOEPA6NGQ2 149 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 SLC9B1P1A6NJY1 282 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 BOLA2-SMG1P6H3BVE0 249 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 SLC33A1O00400 549 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-212ENST00000496458 CASQ2O14958 399 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-212ENST00000496458 KLHL41O60662 606 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 TSC22D2O75157 780 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 FGF19O95750 216 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 CALCAP01258 141 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 IFNB1P01574 187 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 IGHG1P01857 330 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 MATKP42679 507 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 NPBWR1P48145 328 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 CASP9P55211 416 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 KIAA1024LP59773 190 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 RPS27AP62979 156 aaKnown RBP4.28□□□□□ -1.72
SF3B1-212ENST00000496458 CYLC2Q14093 348 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-212ENST00000496458 ETFRF1Q6IPR1 90 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 NEPROQ6NW34 567 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 MIER3Q7Z3K6 550 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 ANKRD46Q86W74 232 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 HIPK1Q86Z02 1210 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 LRRC49Q8IUZ0 686 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 C4orf19Q8IY42 314 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 ELMOD1Q8N336 334 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 FBXW8Q8N3Y1 598 aa4.28□□□□□ -1.72
SF3B1-212ENST00000496458 SFRP1Q8N474 314 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms