RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 RIDAP52758 137 aaKnown RBP4.52□□□□□ -1.69
SSR3-208ENST00000496050 HYAL1Q12794 435 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 EMC2Q15006 297 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 CEBPEQ15744 281 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 HKDC1Q2TB90 917 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 MUC21Q5SSG8 566 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 Q8NBF4 154 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 RELL2Q8NC24 303 aaPredicted RBP4.52□□□□□ -1.69
SSR3-208ENST00000496050 OR1B1Q8NGR6 318 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 DQX1Q8TE96 717 aaKnown RBP4.52□□□□□ -1.69
SSR3-208ENST00000496050 RSPH1Q8WYR4 309 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 NR4A3Q92570 626 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 NCLNQ969V3 563 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 MOCOSQ96EN8 888 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 SLC45A3Q96JT2 553 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 PRICKLE1Q96MT3 831 aaPredicted RBP4.52□□□□□ -1.69
SSR3-208ENST00000496050 ACCSQ96QU6 501 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 NT5DC2Q9H857 520 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 MOB1AQ9H8S9 216 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 ELL3Q9HB65 397 aaPredicted RBP4.52□□□□□ -1.69
SSR3-208ENST00000496050 DEPPQ9NTK1 212 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 THAP10Q9P2Z0 257 aaPredicted RBP4.52□□□□□ -1.69
SSR3-208ENST00000496050 RARRES3Q9UL19 164 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 ZNF175Q9Y473 711 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 ATG4BQ9Y4P1 393 aa4.52□□□□□ -1.69
SSR3-208ENST00000496050 TCF20Q9UGU0 1960 aaKnown RBP4.52□□□□□ -1.69
SSR3-208ENST00000496050 NOTCH4Q99466 2003 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 TRBV5-4A0A0C4DH59 114 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 RGSL1A5PLK6 1076 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 NTN3O00634 580 aaPredicted RBP4.51□□□□□ -1.69
SSR3-208ENST00000496050 ZNF749O43361 778 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 DCXO43602 365 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 BUB1O43683 1085 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 SNAP91O60641 907 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 DUSP11O75319 330 aaKnown RBP4.51□□□□□ -1.69
SSR3-208ENST00000496050 POP4O95707 220 aaKnown RBP4.51□□□□□ -1.69
SSR3-208ENST00000496050 DPEP1P16444 411 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 POLR2FP61218 127 aaKnown RBP4.51□□□□□ -1.69
SSR3-208ENST00000496050 ELAVL2Q12926 359 aaKnown RBP4.51□□□□□ -1.69
SSR3-208ENST00000496050 ITPK1Q13572 414 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 TCHHL1Q5QJ38 904 aaPredicted RBP4.51□□□□□ -1.69
SSR3-208ENST00000496050 CEP85LQ5SZL2 805 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 AGAP7PQ5VUJ5 663 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 LIPKQ5VXJ0 399 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 DPY19L2P2Q6ZN68 376 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 GOLGA7Q7Z5G4 137 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 RANBP3LQ86VV4 465 aaPredicted RBP4.51□□□□□ -1.69
SSR3-208ENST00000496050 CARM1Q86X55 608 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 RNF130Q86XS8 419 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 ZNF781Q8N8C0 355 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 PRSS33Q8NF86 280 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 OR1K1Q8NGR3 316 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 LRRC15Q8TF66 581 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 NPRL2Q8WTW4 380 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 CHPT1Q8WUD6 406 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 NLNQ9BYT8 704 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 VPS33BQ9H267 617 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 EIF3KQ9UBQ5 218 aaKnown RBP4.51□□□□□ -1.69
SSR3-208ENST00000496050 MIOXQ9UGB7 285 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 AURKCQ9UQB9 309 aa4.51□□□□□ -1.69
SSR3-208ENST00000496050 CUX2O14529 1486 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 SYNJ2O15056 1496 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 TRGV8A0A0C4DH27 118 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 RNF212BA8MTL3 300 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 ZNF724A8MTY0 619 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 H7C423 109 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 SOCS3O14543 225 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 FUT1P19526 365 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 CALML3P27482 149 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 MTTPP55157 894 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 NDUFV3P56181 108 aaKnown RBP4.5□□□□□ -1.69
SSR3-208ENST00000496050 GSTO1P78417 241 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 PDZK1IP1Q13113 114 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 SCGB2A2Q13296 93 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 LY6DQ14210 128 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 C2CD6Q53TS8 623 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 DNAJC21Q5F1R6 531 aaKnown RBP4.5□□□□□ -1.69
SSR3-208ENST00000496050 LDLRAP1Q5SW96 308 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 ZNF613Q6PF04 617 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 GPBP1Q86WP2 473 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 FAM131BQ86XD5 332 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 PYROXD2Q8N2H3 581 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 SAMD12Q8N8I0 201 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 CHDHQ8NE62 594 aaPredicted RBP4.5□□□□□ -1.69
SSR3-208ENST00000496050 NABP1Q96AH0 204 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 NAF1Q96HR8 494 aaKnown RBP4.5□□□□□ -1.69
SSR3-208ENST00000496050 CABLES2Q9BTV7 478 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 ECT2Q9H8V3 914 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 Q9HAA7 133 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 MDFICQ9P1T7 246 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 MUTYHQ9UIF7 546 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 ZNF490Q9ULM2 529 aaPredicted RBP4.5□□□□□ -1.69
SSR3-208ENST00000496050 MGAT4AQ9UM21 535 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 SLC9A8Q9Y2E8 581 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 KLHDC2Q9Y2U9 406 aa4.5□□□□□ -1.69
SSR3-208ENST00000496050 IGLV4-3A0A075B6K6 122 aa4.49□□□□□ -1.69
SSR3-208ENST00000496050 NPIPA5A0A0B4J1W7 369 aa4.49□□□□□ -1.69
SSR3-208ENST00000496050 A8MXK9 166 aa4.49□□□□□ -1.69
SSR3-208ENST00000496050 NPIPA5E9PKD4 350 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms