RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 CELA2AP08217 269 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 ALDOCP09972 364 aaKnown RBP15.93■□□□□ 0.14
HDAC6-235ENST00000495515 FAM87AP0C7U9 286 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 GPR143P51810 404 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 STX1BP61266 288 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 SRSF11Q05519 484 aaKnown RBP15.93■□□□□ 0.14
HDAC6-235ENST00000495515 RAPSNQ13702 412 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 PDCD4Q53EL6 469 aaKnown RBP15.93■□□□□ 0.14
HDAC6-235ENST00000495515 ANKRD26P1Q6NSI1 321 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 TCTN3Q6NUS6 607 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 FAM180BQ6P0A1 224 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 ISLR2Q6UXK2 745 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 RNF111Q6ZNA4 994 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 DGAT2L6Q6ZPD8 337 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 HPS6Q86YV9 775 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 RIMKLAQ8IXN7 391 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 VWA5B2Q8N398 1253 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 KRTCAP2Q8N6L1 136 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 GLB1L3Q8NCI6 653 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-235ENST00000495515 OR7G1Q8NGA0 311 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 OR8K3Q8NH51 312 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 C9orf43Q8TAL5 461 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-235ENST00000495515 ZNF675Q8TD23 568 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 ZNF721Q8TF20 911 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 THOC1Q96FV9 657 aaKnown RBP15.93■□□□□ 0.14
HDAC6-235ENST00000495515 CHMP6Q96FZ7 201 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 ABHD17AQ96GS6 310 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 ZNF354BQ96LW1 612 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 EBF4Q9BQW3 602 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 SEMA4CQ9C0C4 833 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 BHLHE41Q9C0J9 482 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-235ENST00000495515 ACSS1Q9NUB1 689 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-235ENST00000495515 PTGFRNQ9P2B2 879 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 TRIM33Q9UPN9 1127 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 CFL2Q9Y281 166 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 ZNF451Q9Y4E5 1061 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 GPR45Q9Y5Y3 372 aa15.93■□□□□ 0.14
HDAC6-235ENST00000495515 DSPP15924 2871 aaKnown RBP15.93■□□□□ 0.14
HDAC6-235ENST00000495515 OR6C76A6NM76 312 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 E9PBE3 544 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 IGKV3-11P04433 115 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 MANFP55145 182 aaKnown RBP15.92■□□□□ 0.14
HDAC6-235ENST00000495515 FUT7Q11130 342 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 MEP1AQ16819 746 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 PRICKLE4Q2TBC4 344 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 ABHD17BQ5VST6 288 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 H3F3CQ6NXT2 135 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 SLC29A4Q7RTT9 530 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 CAMKMTQ7Z624 323 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 LGI4Q8N135 537 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 MIER2Q8N344 545 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 KIF2BQ8N4N8 673 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 SIRT6Q8N6T7 355 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 LSM14AQ8ND56 463 aaKnown RBP15.92■□□□□ 0.14
HDAC6-235ENST00000495515 VPS37AQ8NEZ2 397 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 OR7A2PQ8NGA2 310 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 OR9A2Q8NGT5 310 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 PSMF1Q92530 271 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 TESCQ96BS2 214 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 COQ8BQ96D53 544 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 AMDHD1Q96NU7 426 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 ZNF317Q96PQ6 595 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-235ENST00000495515 LMF1Q96S06 567 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 SMAD5Q99717 465 aaKnown RBP15.92■□□□□ 0.14
HDAC6-235ENST00000495515 DUSP26Q9BV47 211 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 NUDT9Q9BW91 350 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 NSRP1Q9H0G5 558 aaKnown RBP15.92■□□□□ 0.14
HDAC6-235ENST00000495515 EPS8L2Q9H6S3 715 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 ZNF552Q9H707 407 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-235ENST00000495515 MAT2BQ9NZL9 334 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 ZIM2Q9NZV7 527 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 PCSK5Q92824 1860 aa15.92■□□□□ 0.14
HDAC6-235ENST00000495515 CDK2AP1O14519 115 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 ANKRD28O15084 1053 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 SLC22A3O75751 556 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 LAMP1P11279 417 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 GPC1P35052 558 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 SOX11P35716 441 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 KIR3DL1P43629 444 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 ARFIP2P53365 341 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 PGS1Q32NB8 556 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 ZNF628Q5EBL2 1059 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 TMEM198Q66K66 360 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 RPS19BP1Q86WX3 136 aaKnown RBP15.91■□□□□ 0.14
HDAC6-235ENST00000495515 ADCY4Q8NFM4 1077 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 RFWD2Q8NHY2 731 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 SUN3Q8TAQ9 357 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 CTHRC1Q96CG8 243 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 GLIPR2Q9H4G4 154 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 SDR39U1Q9NRG7 319 aaPredicted RBP15.91■□□□□ 0.14
HDAC6-235ENST00000495515 RYDENQ9NUL5 291 aaKnown RBP15.91■□□□□ 0.14
HDAC6-235ENST00000495515 KLHL14Q9P2G3 628 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 PRODH2Q9UF12 536 aa15.91■□□□□ 0.14
HDAC6-235ENST00000495515 SCN2AQ99250 2005 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 A0A1W2PRB8 838 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 FCHO1O14526 889 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 PLOD3O60568 738 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 PRAMEF2O60811 474 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 IFI6P09912 130 aa15.9■□□□□ 0.14
HDAC6-235ENST00000495515 CT62P0C5K7 136 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms