RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 CHCHD5Q9BSY4 110 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 TEX13AQ9BXU3 409 aaPredicted RBP3.63□□□□□ -1.83
SMC4-224ENST00000494612 STRADBQ9C0K7 418 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 DDX47Q9H0S4 455 aaKnown RBP3.63□□□□□ -1.83
SMC4-224ENST00000494612 MIS18AQ9NYP9 233 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 TAS2R16Q9NYV7 291 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 PAK5Q9P286 719 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 FAM153AQ9UHL3 310 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 TRMT6Q9UJA5 497 aaKnown RBP3.63□□□□□ -1.83
SMC4-224ENST00000494612 NUDCQ9Y266 331 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 SMAD5-AS1Q9Y6J3 95 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 LRRIQ1Q96JM4 1722 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 LRRC7Q96NW7 1537 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 FAM135AQ9P2D6 1515 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 UMODL1Q5DID0 1318 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 SALL1Q9NSC2 1324 aa3.63□□□□□ -1.83
SMC4-224ENST00000494612 DEPDC5O75140 1603 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 TP53BP1Q12888 1972 aaPredicted RBP3.62□□□□□ -1.83
SMC4-224ENST00000494612 STRCP1A6NGW2 1772 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 IGLV4-3A0A075B6K6 122 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 TRBV5-4A0A0C4DH59 114 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 KRTAP16-1A8MUX0 517 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 EPM2AB3EWF7 344 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 PRDM1O75626 825 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 SFTPBP07988 381 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 MMP10P09238 476 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 STMN1P16949 149 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 ZNF18P17022 549 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 ACADSBP45954 432 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 PAX8Q06710 450 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 BTG3Q14201 252 aaPredicted RBP3.62□□□□□ -1.83
SMC4-224ENST00000494612 SNAI3Q3KNW1 292 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 MPPE1Q53F39 396 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 TCHHL1Q5QJ38 904 aaPredicted RBP3.62□□□□□ -1.83
SMC4-224ENST00000494612 PLBD1Q6P4A8 553 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 WDR88Q6ZMY6 472 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 CDHR3Q6ZTQ4 885 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 ITIH5Q86UX2 942 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 RNF130Q86XS8 419 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 ABHD12Q8N2K0 398 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 MAPK1IP1LQ8NDC0 245 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 PRSS33Q8NF86 280 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 OR6M1Q8NGM8 313 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 OR6F1Q8NGZ6 308 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 EXOC6Q8TAG9 804 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 ANKRD9Q96BM1 317 aaPredicted RBP3.62□□□□□ -1.83
SMC4-224ENST00000494612 COG3Q96JB2 828 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 RUFY1Q96T51 708 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 CCDC28BQ9BUN5 200 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 XPO4Q9C0E2 1151 aaKnown RBP3.62□□□□□ -1.83
SMC4-224ENST00000494612 ABCG8Q9H221 673 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 GANQ9H2C0 597 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 NMUR1Q9HB89 426 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 SYTL2Q9HCH5 934 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 DEPPQ9NTK1 212 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 ACOXLQ9NUZ1 547 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 DIMT1Q9UNQ2 313 aaKnown RBP3.62□□□□□ -1.83
SMC4-224ENST00000494612 FBXO7Q9Y3I1 522 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 AUP1Q9Y679 476 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 UGGT1Q9NYU2 1555 aa3.62□□□□□ -1.83
SMC4-224ENST00000494612 INO80Q9ULG1 1556 aaPredicted RBP3.62□□□□□ -1.83
SMC4-224ENST00000494612 MED14O60244 1454 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 CCDC18Q5T9S5 1454 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 PLEKHH2Q8IVE3 1493 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 KDM5DQ9BY66 1539 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 TEX48A0A1B0GUV7 120 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 TRAFD1O14545 582 aaPredicted RBP3.61□□□□□ -1.83
SMC4-224ENST00000494612 CRLF1O75462 422 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 OR6B1O95007 311 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 OR9G9P0C7N8 305 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 CT45A8P0DMV1 189 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 CT45A9P0DMV2 189 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 MBL2P11226 248 aaPredicted RBP3.61□□□□□ -1.83
SMC4-224ENST00000494612 CAPN2P17655 700 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 MARCKSP29966 332 aaPredicted RBP3.61□□□□□ -1.83
SMC4-224ENST00000494612 PPP2R1AP30153 589 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 CRYBA2P53672 197 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 SLC12A3P55017 1021 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 NLRP11P59045 1033 aaKnown RBP3.61□□□□□ -1.83
SMC4-224ENST00000494612 RPS4XP62701 263 aaKnown RBP3.61□□□□□ -1.83
SMC4-224ENST00000494612 SRPXP78539 464 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 MFGE8Q08431 387 aaPredicted RBP3.61□□□□□ -1.83
SMC4-224ENST00000494612 WASHC5Q12768 1159 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 RAPSNQ13702 412 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 PDK1Q15118 436 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 SIX1Q15475 284 aaPredicted RBP3.61□□□□□ -1.83
SMC4-224ENST00000494612 CT45A2Q5DJT8 189 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 REG3GQ6UW15 175 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 TIPARPQ7Z3E1 657 aaKnown RBP3.61□□□□□ -1.83
SMC4-224ENST00000494612 CARM1Q86X55 608 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 CATSPER3Q86XQ3 398 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 LINC00518Q8N0U6 118 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 ZNRF1Q8ND25 227 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 LRRC15Q8TF66 581 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 NPRL2Q8WTW4 380 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 CCDC47Q96A33 483 aaKnown RBP3.61□□□□□ -1.83
SMC4-224ENST00000494612 RAB39BQ96DA2 213 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 RAB3CQ96E17 227 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 C16orf58Q96GQ5 468 aa3.61□□□□□ -1.83
SMC4-224ENST00000494612 GPR137Q96N19 417 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms