RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 MS4A12Q9NXJ0 267 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 GRHL1Q9NZI5 618 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 CNIH4Q9P003 139 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 WHRNQ9P202 907 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 B4GALT7Q9UBV7 327 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 CAMK2AQ9UQM7 478 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 SLC6A5Q9Y345 797 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 ASB4Q9Y574 426 aa11.6□□□□□ -0.55
SKA1-205ENST00000494518 A0A0A6YYD5 115 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 C2orf92A0A1B0GVN3 265 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 EIF3HO15372 352 aaKnown RBP eCLIP11.59□□□□□ -0.55
SKA1-205ENST00000494518 ACSL3O95573 720 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 GPR75O95800 540 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 CT62P0C5K7 136 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 FAM58BPP0C7Q3 252 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 MTHFD2P13995 350 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 GFAPP14136 432 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 KLK2P20151 261 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 TACR1P25103 407 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 SERPINB1P30740 379 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 BSGP35613 385 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 ARL1P40616 181 aaPredicted RBP11.59□□□□□ -0.55
SKA1-205ENST00000494518 MASP1P48740 699 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 PLTPP55058 493 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 ILF2Q12905 390 aaKnown RBP11.59□□□□□ -0.55
SKA1-205ENST00000494518 TOMM20Q15388 145 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 NTRK2Q16620 822 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 CPSF6Q16630 551 aaKnown RBP eCLIP11.59□□□□□ -0.55
SKA1-205ENST00000494518 SPRED3Q2MJR0 410 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 ACSF3Q4G176 576 aaPredicted RBP11.59□□□□□ -0.55
SKA1-205ENST00000494518 CDC20BQ86Y33 519 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 TGIF2LYQ8IUE0 185 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 CENPLQ8N0S6 344 aaPredicted RBP11.59□□□□□ -0.55
SKA1-205ENST00000494518 TAGAPQ8N103 731 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 RILPQ96NA2 401 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 FOXC2Q99958 501 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 SH3GL2Q99962 352 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 ACKR4Q9NPB9 350 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 RASSF1Q9NS23 344 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 TEX10Q9NXF1 929 aaPredicted RBP11.59□□□□□ -0.55
SKA1-205ENST00000494518 CPSF2Q9P2I0 782 aaKnown RBP11.59□□□□□ -0.55
SKA1-205ENST00000494518 CBLCQ9ULV8 474 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 RNF11Q9Y3C5 154 aa11.59□□□□□ -0.55
SKA1-205ENST00000494518 A6NNC1 897 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 HSPB2A8KAH6 182 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 FAM47E-STBD1D6RA91 191 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 DVL2O14641 736 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 GNB5O14775 395 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 PGRMC2O15173 223 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 TRIM3O75382 744 aaPredicted RBP11.58□□□□□ -0.56
SKA1-205ENST00000494518 SIX3O95343 332 aaPredicted RBP11.58□□□□□ -0.56
SKA1-205ENST00000494518 CRABP2P29373 138 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 PIK3CBP42338 1070 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 ASCL1P50553 236 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 ZNF136P52737 540 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 PPP2R2AP63151 447 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 PHEXP78562 749 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 CRYZQ08257 329 aaKnown RBP11.58□□□□□ -0.56
SKA1-205ENST00000494518 FOXD4Q12950 439 aaPredicted RBP11.58□□□□□ -0.56
SKA1-205ENST00000494518 CBLBQ13191 982 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 GTF2H2Q13888 395 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 SETDB1Q15047 1291 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 RPS6KA2Q15349 733 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 TRADDQ15628 312 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 HSPB2Q16082 182 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 UAP1Q16222 522 aaPredicted RBP11.58□□□□□ -0.56
SKA1-205ENST00000494518 NNATQ16517 81 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 FLYWCH1Q4VC44 716 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 EIPR1Q53HC9 387 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 DCST1Q5T197 706 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 MROH9Q5TGP6 573 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 FAM219BQ5XKK7 198 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 FBXW10Q5XX13 1052 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 HLA-DQA1Q5Y7H0 255 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 TMEM198Q66K66 360 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 DESI1Q6ICB0 168 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 MRM1Q6IN84 353 aaKnown RBP11.58□□□□□ -0.56
SKA1-205ENST00000494518 GTF2H2CQ6P1K8 395 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 GOLGA7Q7Z5G4 137 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 CHDHQ8NE62 594 aaPredicted RBP11.58□□□□□ -0.56
SKA1-205ENST00000494518 GOT1L1Q8NHS2 421 aaPredicted RBP11.58□□□□□ -0.56
SKA1-205ENST00000494518 NINJ1Q92982 152 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 GNRHR2Q96P88 292 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 CDK15Q96Q40 435 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 TRIB1Q96RU8 372 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 KCNK17Q96T54 332 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 TIMP4Q99727 224 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 PELOQ9BRX2 385 aaKnown RBP11.58□□□□□ -0.56
SKA1-205ENST00000494518 CXXC4Q9H2H0 198 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 EPB41L4BQ9H329 900 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 GSX1Q9H4S2 264 aaPredicted RBP11.58□□□□□ -0.56
SKA1-205ENST00000494518 LYARQ9NX58 379 aaKnown RBP11.58□□□□□ -0.56
SKA1-205ENST00000494518 ADGRE2Q9UHX3 823 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 PYCARDQ9ULZ3 195 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 ARID1AO14497 2285 aa11.58□□□□□ -0.56
SKA1-205ENST00000494518 FAM187AA6NFU0 413 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 OR6C76A6NM76 312 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 SYCE1LA8MT33 242 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 SYT5O00445 386 aa11.57□□□□□ -0.56
SKA1-205ENST00000494518 TP53I11O14683 189 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms