RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 DEFB119Q8N690 84 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 CSNK1A1LQ8N752 337 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 C19orf47Q8N9M1 422 aaKnown RBP10.03□□□□□ -0.8
CLCN6-208ENST00000494028 ATG16L2Q8NAA4 619 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 SETD9Q8NE22 299 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 OR4D11Q8NGI4 311 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 GIPC3Q8TF64 312 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF566Q969W8 418 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 GIMAP5Q96F15 307 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 DHRS1Q96LJ7 313 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 COL21A1Q96P44 957 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 TSC22D3Q99576 134 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 TBC1D17Q9HA65 648 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 LYRM4Q9HD34 91 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 HRASLS2Q9NWW9 162 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 PTTG2Q9NZH5 202 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 TRPC4Q9UBN4 977 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 DAPP1Q9UN19 280 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 NAALAD2Q9Y3Q0 740 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 PCDHGB3Q9Y5G1 929 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 CEPT1Q9Y6K0 416 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 DSPPQ9NZW4 1301 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 SPAG17Q6Q759 2223 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 ARRDC5A6NEK1 342 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 URADA6NGE7 173 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 FAM170BA6NMN3 283 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 B4GAT1O43505 415 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 HCRTR1O43613 425 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 ASNA1O43681 348 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 DNAJB6O75190 326 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 UGT2B11O75310 529 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 HMGN2P05204 90 aaKnown RBP10.02□□□□□ -0.81
CLCN6-208ENST00000494028 HTR1AP08908 422 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 TYRP1P17643 537 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 ZNF10P21506 573 aaPredicted RBP10.02□□□□□ -0.81
CLCN6-208ENST00000494028 AGXTP21549 392 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 MATN1P21941 496 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 BCKDHBP21953 392 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 FUT4P22083 530 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 CD38P28907 300 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 PPP2R1BP30154 601 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 RYKP34925 604 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 CAPZBP47756 277 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 FASLGP48023 281 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 KCNJ5P48544 419 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 MAN2A2P49641 1150 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 RPS6KA3P51812 740 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 NUP107P57740 925 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 NXPH1P58417 271 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 ISL1P61371 349 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 SIM1P81133 766 aaPredicted RBP10.02□□□□□ -0.81
CLCN6-208ENST00000494028 PRR5P85299 388 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 SHC2P98077 582 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 IL1RL1Q01638 556 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 PUM1Q14671 1186 aaKnown RBP eCLIP10.02□□□□□ -0.81
CLCN6-208ENST00000494028 MEP1AQ16819 746 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 DUSP7Q16829 419 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 C6orf141Q5SZD1 244 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 CCDC71Q8IV32 467 aaPredicted RBP10.02□□□□□ -0.81
CLCN6-208ENST00000494028 CCDC116Q8IYX3 515 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 GJD3Q8N144 294 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 SIX5Q8N196 739 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 TTC29Q8NA56 475 aaPredicted RBP10.02□□□□□ -0.81
CLCN6-208ENST00000494028 FAM46DQ8NEK8 389 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 NUP43Q8NFH3 380 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 CADM4Q8NFZ8 388 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 OR9Q2Q8NGE9 314 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 CNIH3Q8TBE1 160 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 SGCDQ92629 289 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 RERGQ96A58 199 aaPredicted RBP10.02□□□□□ -0.81
CLCN6-208ENST00000494028 TMIGD2Q96BF3 282 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 ELP4Q96EB1 424 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 MAGED4Q96JG8 741 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 MS4A4EQ96PG1 132 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 OR7D2Q96RA2 312 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 TREX2Q9BQ50 279 aaPredicted RBP10.02□□□□□ -0.81
CLCN6-208ENST00000494028 YIPF4Q9BSR8 244 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 NPLQ9BXD5 320 aaPredicted RBP10.02□□□□□ -0.81
CLCN6-208ENST00000494028 SEMA6CQ9H3T2 930 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 UCK1Q9HA47 277 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 BCL2L10Q9HD36 194 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 WNT16Q9UBV4 365 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 FBXL21Q9UKT6 434 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 NDRG4Q9ULP0 352 aaKnown RBP10.02□□□□□ -0.81
CLCN6-208ENST00000494028 SLC22A7Q9Y694 548 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 ZNF780BQ9Y6R6 833 aa10.02□□□□□ -0.81
CLCN6-208ENST00000494028 SCN2AQ99250 2005 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 TMEM247A6NEH6 219 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 A8MVJ9 347 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 M0R3H8 397 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 FFAR1O14842 300 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 ZSCAN9O15535 394 aaPredicted RBP10.01□□□□□ -0.81
CLCN6-208ENST00000494028 GALR3O60755 368 aaPredicted RBP10.01□□□□□ -0.81
CLCN6-208ENST00000494028 SEMA7AO75326 666 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 EPPINO95925 133 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 FESP07332 822 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 NR2F1P10589 423 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 RHCEP18577 417 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 CBLP22681 906 aa10.01□□□□□ -0.81
CLCN6-208ENST00000494028 EPHA2P29317 976 aa10.01□□□□□ -0.81
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