RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 USP30Q70CQ3 517 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 CADM3Q8N126 398 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 FBLIM1Q8WUP2 373 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 ASB12Q8WXK4 309 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 YIPF6Q96EC8 236 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 NEURL3Q96EH8 262 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 C17orf62Q9BQA9 187 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 NEK6Q9HC98 313 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 NEUROD4Q9HD90 331 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 CD93Q9NPY3 652 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 ABCB10Q9NRK6 738 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 PIAS3Q9Y6X2 628 aa13.05□□□□□ -0.32
VCP-207ENST00000493886 A0A0A6YYD5 115 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 IFNA14P01570 189 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 STATHP02808 62 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 PEBP1P30086 187 aaKnown RBP13.04□□□□□ -0.32
VCP-207ENST00000493886 FRKP42685 505 aaPredicted RBP13.04□□□□□ -0.32
VCP-207ENST00000493886 SEPHS1P49903 392 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 KIAA1024LP59773 190 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 NPRL3Q12980 569 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 HSPB3Q12988 150 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 KEAP1Q14145 624 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 CEACAM20Q6UY09 585 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 UTS2BQ765I0 119 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 ENTHD1Q8IYW4 607 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 FBXL6Q8N531 539 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 OR2L3Q8NG85 312 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 HTRA1Q92743 480 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 HPS1Q92902 700 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 ZNF566Q969W8 418 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 LGALS12Q96DT0 336 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 ZHX1-C8orf76Q96EF9 292 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 ZNF764Q96H86 408 aaPredicted RBP13.04□□□□□ -0.32
VCP-207ENST00000493886 C6orf62Q9GZU0 229 aaPredicted RBP13.04□□□□□ -0.32
VCP-207ENST00000493886 RNF167Q9H6Y7 350 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 SPHK1Q9NYA1 384 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 ZNF229Q9UJW7 825 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 NDRG4Q9ULP0 352 aaKnown RBP13.04□□□□□ -0.32
VCP-207ENST00000493886 B3GNT3Q9Y2A9 372 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 CA5BQ9Y2D0 317 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 HEBP2Q9Y5Z4 205 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 XIRP2A4UGR9 3374 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 LOC100506127A0A0U1RQW1 187 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 A8MU76 341 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 ADAMDEC1O15204 470 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 HOXC4P09017 264 aaPredicted RBP13.04□□□□□ -0.32
VCP-207ENST00000493886 ACADMP11310 421 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 HOXB3P14651 431 aaPredicted RBP13.04□□□□□ -0.32
VCP-207ENST00000493886 POU2F1P14859 743 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 LTBRP36941 435 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 LIPAP38571 399 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 HAAOP46952 286 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 RPS26P62854 115 aaKnown RBP13.04□□□□□ -0.32
VCP-207ENST00000493886 TRA2BP62995 288 aaKnown RBP13.04□□□□□ -0.32
VCP-207ENST00000493886 ABATP80404 500 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 KCNC4Q03721 635 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 TCEA2Q15560 299 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 ZIC1Q15915 447 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 CCDC58Q4VC31 144 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 ENPP7Q6UWV6 458 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 ZNF793Q6ZN11 406 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 P3H2Q8IVL5 708 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 SLC30A8Q8IWU4 369 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 DEPDC4Q8N2C3 294 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 TMEM145Q8NBT3 493 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 DYNC2LI1Q8TCX1 351 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 APH1BQ8WW43 257 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 JPH3Q8WXH2 748 aaPredicted RBP13.04□□□□□ -0.32
VCP-207ENST00000493886 OR1E3Q8WZA6 343 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 UCN3Q969E3 161 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 ZBED6CLQ96FA7 236 aaPredicted RBP13.04□□□□□ -0.32
VCP-207ENST00000493886 PDXPQ96GD0 296 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 MRGPRX1Q96LB2 322 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 DPH7Q9BTV6 452 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 BTBD2Q9BX70 525 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 ROGDIQ9GZN7 287 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 KLHL31Q9H511 634 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 SIRT3Q9NTG7 399 aaPredicted RBP13.04□□□□□ -0.32
VCP-207ENST00000493886 TBC1D29Q9UFV1 150 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 RAB23Q9ULC3 237 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 SNX11Q9Y5W9 270 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 LYVE1Q9Y5Y7 322 aa13.04□□□□□ -0.32
VCP-207ENST00000493886 SNRNP200O75643 2136 aaKnown RBP13.04□□□□□ -0.32
VCP-207ENST00000493886 PRAMEF25A6NGN4 478 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 EFCAB9A8MZ26 197 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 H0Y8X5 98 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 TNFRSF11BO00300 401 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 DBTP11182 482 aaKnown RBP13.03□□□□□ -0.32
VCP-207ENST00000493886 INAVAQ3KP66 663 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 TMEM35AQ53FP2 167 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 COLEC12Q5KU26 742 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 TNFAIP8L2Q6P589 184 aaPredicted RBP13.03□□□□□ -0.32
VCP-207ENST00000493886 TUBA3EQ6PEY2 450 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 KIAA1324Q6UXG2 1013 aaKnown RBP13.03□□□□□ -0.32
VCP-207ENST00000493886 HORMAD2Q8N7B1 307 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 OR6Q1Q8NGQ2 317 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 MACROD1Q9BQ69 325 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 MROQ9BYG7 248 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 KIR3DX1Q9H7L2 352 aa13.03□□□□□ -0.32
VCP-207ENST00000493886 RLIMQ9NVW2 624 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms