RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 C7orf26Q96N11 449 aa10.8□□□□□ -0.68
CTSA-209ENST00000493522 AGAP4Q96P64 663 aa10.8□□□□□ -0.68
CTSA-209ENST00000493522 CNPPD1Q9BV87 410 aa10.8□□□□□ -0.68
CTSA-209ENST00000493522 MMP25Q9NPA2 562 aa10.8□□□□□ -0.68
CTSA-209ENST00000493522 SLCO1B3Q9NPD5 702 aa10.8□□□□□ -0.68
CTSA-209ENST00000493522 PTGFRNQ9P2B2 879 aa10.8□□□□□ -0.68
CTSA-209ENST00000493522 COPS7AQ9UBW8 275 aa10.8□□□□□ -0.68
CTSA-209ENST00000493522 PSME2Q9UL46 239 aa10.8□□□□□ -0.68
CTSA-209ENST00000493522 ZNF780BQ9Y6R6 833 aa10.8□□□□□ -0.68
CTSA-209ENST00000493522 LRBAP50851 2863 aa10.8□□□□□ -0.68
CTSA-209ENST00000493522 CNTRLQ7Z7A1 2325 aa10.8□□□□□ -0.68
CTSA-209ENST00000493522 A8MUI8 341 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 SLCO1B7G3V0H7 640 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 SDHDO14521 159 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 AKAP10O43572 662 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 SLC35E2P0CK97 266 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 RNF224P0DH78 156 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 BCKDHAP12694 445 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 PORP16435 677 aaPredicted RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 CSNK2A2P19784 350 aaPredicted RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 DDCP20711 480 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 NT5EP21589 574 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 PTGER1P34995 402 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 FEN1P39748 380 aaKnown RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 ASMTP46597 345 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 CLCN2P51788 898 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 ERVK-8P63133 956 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 MAD2L1Q13257 205 aaPredicted RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 MRPL49Q13405 166 aaKnown RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 ZNF750Q32MQ0 723 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 PRR30Q53SZ7 412 aaPredicted RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 CRB2Q5IJ48 1285 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 IL23RQ5VWK5 629 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 B3GNTL1Q67FW5 361 aaPredicted RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 FCRLBQ6BAA4 426 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 FAM71E1Q6IPT2 247 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 ISLR2Q6UXK2 745 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 DGAT2L6Q6ZPD8 337 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 LINC00696Q6ZRV3 163 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 MAMDC2Q7Z304 686 aaPredicted RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 TICAM1Q8IUC6 712 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 WDR75Q8IWA0 830 aaKnown RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 GALNT12Q8IXK2 581 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 LRRC25Q8N386 305 aaPredicted RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 Q8NA96 180 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 MORN4Q8NDC4 146 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 NFAM1Q8NET5 270 aaPredicted RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 PRR7Q8TB68 274 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 SLC2A12Q8TD20 617 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 PTPMT1Q8WUK0 201 aaPredicted RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 RIT1Q92963 219 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 EGLN2Q96KS0 407 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 EPS8L2Q9H6S3 715 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 ZNF552Q9H707 407 aaPredicted RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 AKTIPQ9H8T0 292 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 MEAF6Q9HAF1 191 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 NOP53Q9NZM5 478 aaKnown RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 EHD3Q9NZN3 535 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 LUZP4Q9P127 313 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 BAIAP2L1Q9UHR4 511 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 CES1P1Q9UKY3 287 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 ERVK-19Q9WJR5 959 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 EIF3LQ9Y262 564 aaKnown RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 WBP11Q9Y2W2 641 aaKnown RBP10.79□□□□□ -0.68
CTSA-209ENST00000493522 HIVEP3Q5T1R4 2406 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 SHANK1Q9Y566 2161 aa10.79□□□□□ -0.68
CTSA-209ENST00000493522 GOLGA8QA0A0J9YX86 632 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 GOLGA8OA6NCC3 632 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 GOLGA8NF8WBI6 632 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 PRPS2P11908 318 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 LBPP18428 481 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 NTSP30990 170 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 SOX11P35716 441 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 DUSP2Q05923 314 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 MFAP5Q13361 173 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 ZNF267Q14586 743 aaPredicted RBP10.78□□□□□ -0.68
CTSA-209ENST00000493522 PTGR1Q14914 329 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 SPRED3Q2MJR0 410 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 ABHD17BQ5VST6 288 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 SLC6A19Q695T7 634 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 NXNQ6DKJ4 435 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 ANKRD26P1Q6NSI1 321 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 SLC5A8Q8N695 610 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 ZNF321PQ8N8H1 164 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.78□□□□□ -0.68
CTSA-209ENST00000493522 ELP5Q8TE02 316 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 PSMF1Q92530 271 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 TM9SF4Q92544 642 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 PPCDCQ96CD2 204 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 CNRIP1Q96F85 164 aaPredicted RBP10.78□□□□□ -0.68
CTSA-209ENST00000493522 FBXL20Q96IG2 436 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 BBS4Q96RK4 519 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 SMAD5Q99717 465 aaKnown RBP10.78□□□□□ -0.68
CTSA-209ENST00000493522 MFRPQ9BY79 579 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 DEFB126Q9BYW3 111 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 BRINP2Q9C0B6 783 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 REEP4Q9H6H4 257 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 SLC35C2Q9NQQ7 365 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 TEKT2Q9UIF3 430 aa10.78□□□□□ -0.68
CTSA-209ENST00000493522 USH1CQ9Y6N9 552 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms