RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ZFP36L2P47974 494 aaKnown RBP16.07■□□□□ 0.16
LIME1-208ENST00000493265 MRPL19P49406 292 aaKnown RBP16.07■□□□□ 0.16
LIME1-208ENST00000493265 PHC1P78364 1004 aa16.07■□□□□ 0.16
LIME1-208ENST00000493265 IRX1P78414 480 aaPredicted RBP16.07■□□□□ 0.16
LIME1-208ENST00000493265 IGLV3-21P80748 117 aaPredicted RBP16.07■□□□□ 0.16
LIME1-208ENST00000493265 VPS26BQ4G0F5 336 aa16.07■□□□□ 0.16
LIME1-208ENST00000493265 C6orf163Q5TEZ5 329 aa16.07■□□□□ 0.16
LIME1-208ENST00000493265 TMEM205Q6UW68 189 aa16.07■□□□□ 0.16
LIME1-208ENST00000493265 SAMD14Q8IZD0 417 aaPredicted RBP16.07■□□□□ 0.16
LIME1-208ENST00000493265 ST13P4Q8IZP2 240 aaPredicted RBP16.07■□□□□ 0.16
LIME1-208ENST00000493265 CLECL1Q8IZS7 167 aa16.07■□□□□ 0.16
LIME1-208ENST00000493265 AMER2Q8N7J2 671 aa16.07■□□□□ 0.16
LIME1-208ENST00000493265 ANKS4BQ8N8V4 417 aa16.07■□□□□ 0.16
LIME1-208ENST00000493265 OR9A2Q8NGT5 310 aa16.07■□□□□ 0.16
LIME1-208ENST00000493265 KAT2AQ92830 837 aa16.07■□□□□ 0.16
LIME1-208ENST00000493265 RIT1Q92963 219 aa16.07■□□□□ 0.16
LIME1-208ENST00000493265 MAGED4Q96JG8 741 aa16.07■□□□□ 0.16
LIME1-208ENST00000493265 FAM117AQ9C073 453 aa16.07■□□□□ 0.16
LIME1-208ENST00000493265 GLIPR2Q9H4G4 154 aa16.07■□□□□ 0.16
LIME1-208ENST00000493265 PIEZO2Q9H5I5 2752 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 CCDC154A6NI56 674 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 C17orf105B2RV13 164 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 MASP2O00187 686 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 PEX12O00623 359 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 C6orf47O95873 294 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 IL6P05231 212 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 PGRP06401 933 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 ATP1A4Q13733 1029 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 ZNF267Q14586 743 aaPredicted RBP16.06■□□□□ 0.16
LIME1-208ENST00000493265 DPY19L1Q2PZI1 675 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 PAPD4Q6PIY7 484 aaKnown RBP16.06■□□□□ 0.16
LIME1-208ENST00000493265 BLOC1S3Q6QNY0 202 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 KIRREL2Q6UWL6 708 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 CAMKMTQ7Z624 323 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 MRGPREQ86SM8 312 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 SUN3Q8TAQ9 357 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 SPDL1Q96EA4 605 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 ZBED6CLQ96FA7 236 aaPredicted RBP16.06■□□□□ 0.16
LIME1-208ENST00000493265 ZNF764Q96H86 408 aaPredicted RBP16.06■□□□□ 0.16
LIME1-208ENST00000493265 AMDHD1Q96NU7 426 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 LRRC37BQ96QE4 947 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 CNPPD1Q9BV87 410 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 ADAP2Q9NPF8 381 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 CLCA3PQ9Y6N3 262 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 CROCCQ5TZA2 2017 aa16.06■□□□□ 0.16
LIME1-208ENST00000493265 AHCTF1Q8WYP5 2266 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 LOC100653049A0A140TA62 436 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 ZNF891A8MT65 544 aaPredicted RBP16.05■□□□□ 0.16
LIME1-208ENST00000493265 B8ZZF3 427 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 KRT34O76011 436 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 CYC1P08574 325 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 CT62P0C5K7 136 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 CAPN3P20807 821 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 WNT3P56703 355 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 MRPS35P82673 323 aaKnown RBP16.05■□□□□ 0.16
LIME1-208ENST00000493265 RCAN2Q14206 197 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 ELAVL1Q15717 326 aaKnown RBP16.05■□□□□ 0.16
LIME1-208ENST00000493265 ANXA8L1Q5VT79 327 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 FAM111BQ6SJ93 734 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 TMEM107Q6UX40 140 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 SZRD1Q7Z422 152 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 SNX32Q86XE0 403 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 GALNT12Q8IXK2 581 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 POU5F2Q8N7G0 328 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 VPS37AQ8NEZ2 397 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 OR11G2Q8NGC1 345 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 OR8J2Q8NGG1 315 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 OR4A15Q8NGL6 344 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 ZFP28Q8NHY6 868 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 PTPMT1Q8WUK0 201 aaPredicted RBP16.05■□□□□ 0.16
LIME1-208ENST00000493265 ERP27Q96DN0 273 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 PELOQ9BRX2 385 aaKnown RBP16.05■□□□□ 0.16
LIME1-208ENST00000493265 CCDC106Q9BWC9 280 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 OR8D2Q9GZM6 311 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 MYLK2Q9H1R3 596 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 ZNF160Q9HCG1 818 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 P4HTMQ9NXG6 502 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 FBXL4Q9UKA2 621 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 SNX8Q9Y5X2 465 aa16.05■□□□□ 0.16
LIME1-208ENST00000493265 IGHV1-45A0A0A0MS14 117 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 NSG1A0A0A6YYJ2 146 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 PRSS51A0A1B0GVH4 220 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 K7ENP7 123 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 HRKO00198 91 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 EFSO43281 561 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 DYRK3O43781 588 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 ATP1B1P05026 303 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 SNRPB2P08579 225 aaKnown RBP16.04■□□□□ 0.16
LIME1-208ENST00000493265 COX6A1P12074 109 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 SOAT1P35610 550 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 CDK9P50750 372 aaKnown RBP16.04■□□□□ 0.16
LIME1-208ENST00000493265 BIKQ13323 160 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 PCOLCEQ15113 449 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 MAPKAPK3Q16644 382 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 C6orf10Q5SRN2 563 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 INO80CQ6PI98 192 aaPredicted RBP16.04■□□□□ 0.16
LIME1-208ENST00000493265 SLC2A7Q6PXP3 512 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 DNAJC14Q6Y2X3 702 aaPredicted RBP16.04■□□□□ 0.16
LIME1-208ENST00000493265 CCDC81Q6ZN84 652 aa16.04■□□□□ 0.16
LIME1-208ENST00000493265 TREML1Q86YW5 311 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms