RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.52	□□□□□ -0.41
SAMM50-204	ENST00000493161	SPPL2A	Q8TCT8	520 aa		12.52	□□□□□ -0.41
SAMM50-204	ENST00000493161	TANK	Q92844	425 aa		12.52	□□□□□ -0.41
SAMM50-204	ENST00000493161	HSPBAP1	Q96EW2	488 aa		12.52	□□□□□ -0.41
SAMM50-204	ENST00000493161	CMTM7	Q96FZ5	175 aa		12.52	□□□□□ -0.41
SAMM50-204	ENST00000493161	ART5	Q96L15	291 aa		12.52	□□□□□ -0.41
SAMM50-204	ENST00000493161	MDFI	Q99750	246 aa		12.52	□□□□□ -0.41
SAMM50-204	ENST00000493161	ZNF717	Q9BY31	904 aa	Predicted RBP	12.52	□□□□□ -0.41
SAMM50-204	ENST00000493161	NEUROD4	Q9HD90	331 aa		12.52	□□□□□ -0.41
SAMM50-204	ENST00000493161	C15orf41	Q9Y2V0	281 aa		12.52	□□□□□ -0.41
SAMM50-204	ENST00000493161	FN1	P02751	2386 aa	Known RBP	12.52	□□□□□ -0.41
SAMM50-204	ENST00000493161		A0A1W2PR48	441 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	CD8B2	A6NJW9	211 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	DYRK3	O43781	588 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	TMPRSS11D	O60235	418 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	OR10H2	O60403	315 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	EED	O75530	441 aa	Known RBP	12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	GPR75	O95800	540 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	LY6G6D	O95868	133 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	NAGLU	P54802	743 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	SLC12A2	P55011	1212 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	POU4F1	Q01851	419 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	SPRED3	Q2MJR0	410 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	DESI1	Q6ICB0	168 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	SYDE1	Q6ZW31	735 aa	Predicted RBP	12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	KLHL7	Q8IXQ5	586 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	PM20D2	Q8IYS1	436 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	PRR22	Q8IZ63	422 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	HUS1B	Q8NHY5	278 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	SLC44A1	Q8WWI5	657 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	RIT1	Q92963	219 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	YIPF4	Q9BSR8	244 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	ANGPTL4	Q9BY76	406 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	TRIM31	Q9BZY9	425 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	ZNF395	Q9H8N7	513 aa	Predicted RBP	12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	TEX10	Q9NXF1	929 aa	Predicted RBP	12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	MS4A12	Q9NXJ0	267 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	RNF112	Q9ULX5	631 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	SNX12	Q9UMY4	172 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	ASB4	Q9Y574	426 aa		12.51	□□□□□ -0.41
SAMM50-204	ENST00000493161	C2orf92	A0A1B0GVN3	265 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161		E7ESA3	106 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	GNB5	O14775	395 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	SEC31A	O94979	1220 aa	Known RBP	12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	HEXA	P06865	529 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	CT62	P0C5K7	136 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	OPRM1	P35372	400 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	CASP3	P42574	277 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	RAP1GDS1	P52306	607 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	SORD	Q00796	357 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	DLG1	Q12959	904 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	RPS6KA2	Q15349	733 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	TOMM20	Q15388	145 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	NHSL2	Q5HYW2	709 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	LRRC70	Q7Z2Q7	622 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	LUZP2	Q86TE4	346 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	YRDC	Q86U90	279 aa	Known RBP	12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	TAGAP	Q8N103	731 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	ABTB1	Q969K4	478 aa	Predicted RBP	12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	RGMA	Q96B86	450 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	NTNG2	Q96CW9	530 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	UBXN10	Q96LJ8	280 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	MTERF1	Q99551	399 aa	Known RBP	12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	RBM24	Q9BX46	236 aa	Known RBP	12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	ALG9	Q9H6U8	611 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	BEX4	Q9NWD9	120 aa	Predicted RBP	12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	GALNT8	Q9NY28	637 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	PHF11	Q9UIL8	331 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	NPFFR2	Q9Y5X5	522 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	IKBKG	Q9Y6K9	419 aa		12.5	□□□□□ -0.41
SAMM50-204	ENST00000493161	C2orf72	A6NCS6	295 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	OR6C76	A6NM76	312 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	UBXN8	O00124	270 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	TP53I11	O14683	189 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	PGRMC2	O15173	223 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	SNX4	O95219	450 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	GBA	P04062	536 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	S100B	P04271	92 aa	Predicted RBP	12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	PTPN6	P29350	595 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	SSTR1	P30872	391 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	TLX1	P31314	330 aa	Predicted RBP	12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	BSG	P35613	385 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	RPL21	P46778	160 aa	Known RBP	12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	MASP1	P48740	699 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	ATP6V0D1	P61421	351 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	RPS13	P62277	151 aa	Known RBP	12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	DR1	Q01658	176 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	BIK	Q13323	160 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	TBCEL	Q5QJ74	424 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	MRM1	Q6IN84	353 aa	Known RBP	12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	GRHL2	Q6ISB3	625 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	TAOK1	Q7L7X3	1001 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	PACS2	Q86VP3	889 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	ZBED8	Q8IZ13	594 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	ZCCHC7	Q8N3Z6	543 aa	Known RBP	12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	C7orf57	Q8NEG2	295 aa		12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	FAM83F	Q8NEG4	500 aa	Predicted RBP	12.49	□□□□□ -0.41
SAMM50-204	ENST00000493161	UBE2E3	Q969T4	207 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms