RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 UTP23Q9BRU9 249 aaKnown RBP12.99□□□□□ -0.33
CCM2-217ENST00000492883 RNF32Q9H0A6 362 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 REEP4Q9H6H4 257 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 AKTIPQ9H8T0 292 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 ANKRD10Q9NXR5 420 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 TAS2R7Q9NYW3 318 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 SH3BP4Q9P0V3 963 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 LUZP4Q9P127 313 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 CSAG2Q9Y5P2 127 aa12.99□□□□□ -0.33
CCM2-217ENST00000492883 TRPC5OSA6NMA1 111 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 TTLL8A6PVC2 850 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 WWP2O00308 870 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 HDAC3O15379 428 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 ITGA10O75578 1167 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 IGKV3-11P04433 115 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 CT62P0C5K7 136 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 SSTR4P31391 388 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 PTGER1P34995 402 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 CD96P40200 585 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 DUSP2Q05923 314 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 MAP4K2Q12851 820 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 SMU1Q2TAY7 513 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 PRICKLE4Q2TBC4 344 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 FAM111BQ6SJ93 734 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 SLC29A4Q7RTT9 530 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 R3HCC1LQ7Z5L2 792 aaKnown RBP12.98□□□□□ -0.33
CCM2-217ENST00000492883 VWA5B2Q8N398 1253 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 TMEM156Q8N614 296 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 PIWIL2Q8TC59 973 aaKnown RBP12.98□□□□□ -0.33
CCM2-217ENST00000492883 PPCDCQ96CD2 204 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 MEAF6Q9HAF1 191 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 NOP53Q9NZM5 478 aaKnown RBP12.98□□□□□ -0.33
CCM2-217ENST00000492883 MYOTQ9UBF9 498 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 BCAP29Q9UHQ4 241 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 EXO1Q9UQ84 846 aaKnown RBP12.98□□□□□ -0.33
CCM2-217ENST00000492883 YARS2Q9Y2Z4 477 aaKnown RBP12.98□□□□□ -0.33
CCM2-217ENST00000492883 CCDC88CQ9P219 2028 aa12.98□□□□□ -0.33
CCM2-217ENST00000492883 TRAV17A0A0B4J275 112 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 OR6C76A6NM76 312 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 SLC28A2O43868 658 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 OR2J2O76002 312 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 G6PDP11413 515 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 DDX5P17844 614 aaKnown RBP12.97□□□□□ -0.33
CCM2-217ENST00000492883 LBPP18428 481 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 NTSP30990 170 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 HPCAL1P37235 193 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 CYB561P49447 251 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 TNFSF10P50591 281 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 NCBP2P52298 156 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCM2-217ENST00000492883 SLC37A1P57057 533 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 FUT7Q11130 342 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 TUBA3CQ13748 450 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 ZNF169Q14929 603 aaPredicted RBP12.97□□□□□ -0.33
CCM2-217ENST00000492883 LTB4RQ15722 352 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 PRSS53Q2L4Q9 553 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 HLA-DQA1Q5Y7H0 255 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 SPINK14Q6IE38 97 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 ANKRD26P1Q6NSI1 321 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 TUBA3EQ6PEY2 450 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 C16orf47Q6ZP98 133 aaPredicted RBP12.97□□□□□ -0.33
CCM2-217ENST00000492883 ZNF605Q86T29 641 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 C9orf40Q8IXQ3 194 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 FAM9CQ8IZT9 166 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 ARMC10Q8N2F6 343 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 ARFGAP2Q8N6H7 521 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 HORMAD2Q8N7B1 307 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 OR7G1Q8NGA0 311 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 OR9A2Q8NGT5 310 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 NUBPLQ8TB37 319 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 MAGEB18Q96M61 343 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 GAL3ST4Q96RP7 486 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 OR10A5Q9H207 317 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 MED4Q9NPJ6 270 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 MAT2BQ9NZL9 334 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 LRFN1Q9P244 771 aa12.97□□□□□ -0.33
CCM2-217ENST00000492883 DSPP15924 2871 aaKnown RBP12.97□□□□□ -0.33
CCM2-217ENST00000492883 NUP210LQ5VU65 1888 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 C2orf92A0A1B0GVN3 265 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 TMEM200CA6NKL6 621 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 MYO1GB0I1T2 1018 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 CDK2AP1O14519 115 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 CD46P15529 392 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 PRPS1L1P21108 318 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 RPL3P39023 403 aaKnown RBP12.96□□□□□ -0.33
CCM2-217ENST00000492883 HLCSP50747 726 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 SSR4P51571 173 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 MGAT2Q10469 447 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 PTGR1Q14914 329 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 EXOSC7Q15024 291 aaKnown RBP12.96□□□□□ -0.33
CCM2-217ENST00000492883 OR1C1Q15619 314 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 CEBPEQ15744 281 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 TRMT12Q53H54 448 aaKnown RBP12.96□□□□□ -0.33
CCM2-217ENST00000492883 NXNQ6DKJ4 435 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 LARP4Q71RC2 724 aaKnown RBP eCLIP12.96□□□□□ -0.339e-6■■■■■ 29.6
CCM2-217ENST00000492883 CKAP2Q8WWK9 683 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 ASB15Q8WXK1 588 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 KAT2AQ92830 837 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 MTERF3Q96E29 417 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 C7orf26Q96N11 449 aa12.96□□□□□ -0.33
CCM2-217ENST00000492883 PRPF18Q99633 342 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms