RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 SLC15A3Q8IY34 581 aa20.64■□□□□ 0.9
PSPC1-204ENST00000492741 RNF148Q8N7C7 305 aa20.64■□□□□ 0.9
PSPC1-204ENST00000492741 PSMA8Q8TAA3 256 aa20.64■□□□□ 0.9
PSPC1-204ENST00000492741 DOK4Q8TEW6 326 aa20.64■□□□□ 0.9
PSPC1-204ENST00000492741 RIT1Q92963 219 aa20.64■□□□□ 0.9
PSPC1-204ENST00000492741 TMEM125Q96AQ2 219 aa20.64■□□□□ 0.9
PSPC1-204ENST00000492741 ELP4Q96EB1 424 aa20.64■□□□□ 0.9
PSPC1-204ENST00000492741 CLPTM1LQ96KA5 538 aa20.64■□□□□ 0.9
PSPC1-204ENST00000492741 SLC46A1Q96NT5 459 aa20.64■□□□□ 0.9
PSPC1-204ENST00000492741 PELOQ9BRX2 385 aaKnown RBP20.64■□□□□ 0.9
PSPC1-204ENST00000492741 SLC26A1Q9H2B4 701 aa20.64■□□□□ 0.9
PSPC1-204ENST00000492741 MMADHCQ9H3L0 296 aaPredicted RBP20.64■□□□□ 0.9
PSPC1-204ENST00000492741 PNO1Q9NRX1 252 aaKnown RBP20.64■□□□□ 0.9
PSPC1-204ENST00000492741 ZCCHC3Q9NUD5 404 aaKnown RBP20.64■□□□□ 0.9
PSPC1-204ENST00000492741 TMEM181Q9P2C4 612 aa20.64■□□□□ 0.9
PSPC1-204ENST00000492741 NXT1Q9UKK6 140 aaKnown RBP20.64■□□□□ 0.9
PSPC1-204ENST00000492741 FER1L5A0AVI2 2057 aa20.64■□□□□ 0.89
PSPC1-204ENST00000492741 NUP214P35658 2090 aaPredicted RBP20.64■□□□□ 0.89
PSPC1-204ENST00000492741 VSTM2BA6NLU5 285 aa20.64■□□□□ 0.89
PSPC1-204ENST00000492741 IDSB3KWA1 339 aa20.64■□□□□ 0.89
PSPC1-204ENST00000492741 KRT75O95678 551 aa20.64■□□□□ 0.89
PSPC1-204ENST00000492741 PPIBP23284 216 aaKnown RBP20.64■□□□□ 0.89
PSPC1-204ENST00000492741 SLC5A2P31639 672 aa20.64■□□□□ 0.89
PSPC1-204ENST00000492741 STT3AP46977 705 aa20.64■□□□□ 0.89
PSPC1-204ENST00000492741 MRPS35P82673 323 aaKnown RBP20.64■□□□□ 0.89
PSPC1-204ENST00000492741 TP53BP2Q13625 1128 aa20.64■□□□□ 0.89
PSPC1-204ENST00000492741 SELPLGQ14242 412 aa20.64■□□□□ 0.89
PSPC1-204ENST00000492741 MRPL14Q6P1L8 145 aaKnown RBP20.64■□□□□ 0.89
PSPC1-204ENST00000492741 TIPARPQ7Z3E1 657 aaKnown RBP20.64■□□□□ 0.89
PSPC1-204ENST00000492741 ZFP90Q8TF47 636 aa20.64■□□□□ 0.89
PSPC1-204ENST00000492741 METTL21AQ8WXB1 218 aa20.64■□□□□ 0.89
PSPC1-204ENST00000492741 RAB3IPQ96QF0 476 aaPredicted RBP20.64■□□□□ 0.89
PSPC1-204ENST00000492741 B3GNT4Q9C0J1 378 aa20.64■□□□□ 0.89
PSPC1-204ENST00000492741 CMTM6Q9NX76 183 aa20.64■□□□□ 0.89
PSPC1-204ENST00000492741 EMC8O43402 210 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 EMP2P54851 167 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 PRR5P85299 388 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 SAMD4BQ5PRF9 694 aaKnown RBP20.63■□□□□ 0.89
PSPC1-204ENST00000492741 BHLHB9Q6PI77 547 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 FAM198BQ6UWH4 519 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 ZNF517Q6ZMY9 492 aaPredicted RBP20.63■□□□□ 0.89
PSPC1-204ENST00000492741 ESX1Q8N693 406 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 PLPP5Q8NEB5 264 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 FAM120BQ96EK7 910 aaKnown RBP20.63■□□□□ 0.89
PSPC1-204ENST00000492741 CPPED1Q9BRF8 314 aaPredicted RBP20.63■□□□□ 0.89
PSPC1-204ENST00000492741 CRB3Q9BUF7 120 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 TRIM4Q9C037 500 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 PIF1Q9H611 641 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 WDR54Q9H977 334 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 DDX18Q9NVP1 670 aaKnown RBP20.63■□□□□ 0.89
PSPC1-204ENST00000492741 C3orf18Q9UK00 162 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 CORO2BQ9UQ03 480 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 NEUROG3Q9Y4Z2 214 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 CLDN16Q9Y5I7 305 aa20.63■□□□□ 0.89
PSPC1-204ENST00000492741 A8MUA0 341 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 NME4O00746 187 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 DYRK3O43781 588 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 CNOT3O75175 753 aaKnown RBP20.62■□□□□ 0.89
PSPC1-204ENST00000492741 PDE5AO76074 875 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 RECKO95980 971 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 CD63P08962 238 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 NQO1P15559 274 aaKnown RBP20.62■□□□□ 0.89
PSPC1-204ENST00000492741 TCN1P20061 433 aaPredicted RBP20.62■□□□□ 0.89
PSPC1-204ENST00000492741 TCN2P20062 427 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 PGDP52209 483 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 NCF4Q15080 339 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 PRICKLE4Q2TBC4 344 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 FAM111BQ6SJ93 734 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 C6orf120Q7Z4R8 191 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 IFNEQ86WN2 208 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 GALNT12Q8IXK2 581 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 MOAP1Q96BY2 351 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 TMEM121BQ9BXQ6 578 aaPredicted RBP20.62■□□□□ 0.89
PSPC1-204ENST00000492741 SPRY4Q9C004 299 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 IKZF5Q9H5V7 419 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 ABCD2Q9UBJ2 740 aa20.62■□□□□ 0.89
PSPC1-204ENST00000492741 IGKV3D-11A0A0A0MRZ8 115 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 CFAP73A6NFT4 308 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 SLITRK5O94991 958 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 CRATP43155 626 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 CASP9P55211 416 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 TRMT12Q53H54 448 aaKnown RBP20.61■□□□□ 0.89
PSPC1-204ENST00000492741 ZNF628Q5EBL2 1059 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 CPZQ66K79 652 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 TMEM64Q6YI46 380 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 ULK2Q8IYT8 1036 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 NLGN4XQ8N0W4 816 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 VWA5B2Q8N398 1253 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 FBXW8Q8N3Y1 598 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 NUP43Q8NFH3 380 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 NLGN4YQ8NFZ3 816 aaPredicted RBP20.61■□□□□ 0.89
PSPC1-204ENST00000492741 OR7G2Q8NG99 324 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 OR10A6Q8NH74 314 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 SFXN5Q8TD22 340 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 SPSB2Q99619 263 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 ANKRA2Q9H9E1 313 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 CXorf21Q9HAI6 301 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 MAT2BQ9NZL9 334 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 PTGFRNQ9P2B2 879 aa20.61■□□□□ 0.89
PSPC1-204ENST00000492741 AP3M1Q9Y2T2 418 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms