RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 KAT2AQ92830 837 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 MTERF3Q96E29 417 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 CNRIP1Q96F85 164 aaPredicted RBP11.77□□□□□ -0.52
HMGN1-220ENST00000492280 GPA33Q99795 319 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 TEX101Q9BY14 249 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 PELI2Q9HAT8 420 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 WDR70Q9NW82 654 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 TICRRQ7Z2Z1 1910 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 FRYLO94915 3013 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 WDFY3Q8IZQ1 3526 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 A0A1W2PR48 441 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 SOBPA7XYQ1 873 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 WWP2O00308 870 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 EPPINO95925 133 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 HMGN2P05204 90 aaKnown RBP11.77□□□□□ -0.53
HMGN1-220ENST00000492280 CHRM4P08173 479 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 COL9A1P20849 921 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 SEPHS1P49903 392 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 CRISP1P54107 249 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 PRDX1Q06830 199 aaKnown RBP11.77□□□□□ -0.53
HMGN1-220ENST00000492280 HYAL2Q12891 473 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 TARDBPQ13148 414 aaKnown RBP eCLIP11.77□□□□□ -0.539e-9■■■□□ 17.5
HMGN1-220ENST00000492280 TSTQ16762 297 aaKnown RBP11.77□□□□□ -0.53
HMGN1-220ENST00000492280 DUSP6Q16828 381 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 TRIM16LQ309B1 348 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 UBE2UQ5VVX9 321 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 FRMPD2BQ6IN97 320 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 OR4N5Q8IXE1 308 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 MCFD2Q8NI22 146 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 WDR36Q8NI36 951 aaKnown RBP11.77□□□□□ -0.53
HMGN1-220ENST00000492280 ZCCHC10Q8TBK6 192 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 SLC38A4Q969I6 547 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 ZBED6CLQ96FA7 236 aaPredicted RBP11.77□□□□□ -0.53
HMGN1-220ENST00000492280 AMDHD1Q96NU7 426 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 BBS4Q96RK4 519 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 MRPS30Q9NP92 439 aaKnown RBP11.77□□□□□ -0.53
HMGN1-220ENST00000492280 ABCB10Q9NRK6 738 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 TMEM74BQ9NUR3 256 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 FANCMQ8IYD8 2048 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 DMDP11532 3685 aa11.77□□□□□ -0.53
HMGN1-220ENST00000492280 SMIM30A4D0T7 59 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 ZNF860A6NHJ4 632 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 DNAJB6O75190 326 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 AIFM1O95831 613 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 TGM4P49221 684 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 OLR1P78380 273 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 RPA4Q13156 261 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 SGCGQ13326 291 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 OR6T1Q8NGN1 323 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 OR6Q1Q8NGQ2 317 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 IPCEF1Q8WWN9 437 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-220ENST00000492280 POP5Q969H6 163 aaKnown RBP11.76□□□□□ -0.53
HMGN1-220ENST00000492280 COL26A1Q96A83 441 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 RSPH9Q9H1X1 276 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-220ENST00000492280 NECTIN3Q9NQS3 549 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 GMEB1Q9Y692 573 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 A0A0A6YYD5 115 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 CLDN24A6NM45 220 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 ISM1B1AKI9 464 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 IFNA14P01570 189 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 APODP05090 189 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 MC3RP41968 323 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 CDC42P60953 191 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 ID2Q02363 134 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 MLLT1Q03111 559 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-220ENST00000492280 MAP4K2Q12851 820 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 LRRC32Q14392 662 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 TBCEQ15813 527 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-220ENST00000492280 TOR1AIP1Q5JTV8 583 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 UTS2BQ765I0 119 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 IQCHQ86VS3 1027 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 TCEANCQ8N8B7 351 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 ACOT4Q8N9L9 421 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 OR9A2Q8NGT5 310 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 TSACCQ96A04 125 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-220ENST00000492280 MTIF3Q9H2K0 278 aaKnown RBP11.76□□□□□ -0.53
HMGN1-220ENST00000492280 DSN1Q9H410 356 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 NEUROD4Q9HD90 331 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 HMG20AQ9NP66 347 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 PHPT1Q9NRX4 125 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-220ENST00000492280 APOBEC3BQ9UH17 382 aaKnown RBP11.76□□□□□ -0.53
HMGN1-220ENST00000492280 IL20RAQ9UHF4 553 aa11.76□□□□□ -0.53
HMGN1-220ENST00000492280 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-220ENST00000492280 KRBA1A5PL33 1030 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 DSCR3O14972 297 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 ZW10O43264 779 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 SEMA3DO95025 777 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 RPN2P04844 631 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 PCSK2P16519 638 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 GTF2E2P29084 291 aaKnown RBP11.75□□□□□ -0.53
HMGN1-220ENST00000492280 SERPINB10P48595 397 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 KCNC4Q03721 635 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 ZNF846Q147U1 533 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 SHHQ15465 462 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 GPAT3Q53EU6 434 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 TMEM196Q5HYL7 178 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 DCST1Q5T197 706 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 SYCE2Q6PIF2 218 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 SUN3Q8TAQ9 357 aa11.75□□□□□ -0.53
HMGN1-220ENST00000492280 CHPT1Q8WUD6 406 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms