RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 ADAMTSL2Q86TH1 951 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 DND1Q8IYX4 353 aaKnown RBP10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 BBOF1Q8ND07 529 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 MBD3L2Q8NHZ7 208 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 ESAMQ96AP7 390 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 HSPBAP1Q96EW2 488 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 WDR34Q96EX3 536 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 WDYHV1Q96HA8 205 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 FBXL20Q96IG2 436 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 DGAT2Q96PD7 388 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 DOHHQ9BU89 302 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 MS4A8Q9BY19 250 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 ROGDIQ9GZN7 287 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 UBQLN3Q9H347 655 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 DNAJC11Q9NVH1 559 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 CAMK2AQ9UQM7 478 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 SLC6A5Q9Y345 797 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 IKBKGQ9Y6K9 419 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 DOCK7Q96N67 2140 aa10.67□□□□□ -0.7
CACNA1C-228ENST00000492150 YLPM1P49750 1951 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 SH3D21A4FU49 640 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 DNALI1O14645 258 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 CLGNO14967 610 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 TRAPPC6AO75865 159 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 IL18BPO95998 194 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 CLPSP04118 112 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 HPNP05981 417 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 HIST1H1TP22492 207 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 CPN2P22792 545 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 CDC25BP30305 580 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 OPRM1P35372 400 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 GGT5P36269 586 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 MSH2P43246 934 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 CDK9P50750 372 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 VEZF1Q14119 521 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 TGFBIQ15582 683 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 CLEC12BQ2HXU8 276 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 NHSL2Q5HYW2 709 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 HP1BP3Q5SSJ5 553 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 DCST1Q5T197 706 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 STEAP4Q687X5 459 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 TMEM64Q6YI46 380 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 SYDE1Q6ZW31 735 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 FRA10AC1Q70Z53 315 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 ZC3HC1Q86WB0 502 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 PM20D2Q8IYS1 436 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 SRFBP1Q8NEF9 429 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 C7orf57Q8NEG2 295 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 ZNF473Q8WTR7 871 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 PTCD3Q96EY7 689 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 CFAP36Q96G28 342 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 RBM18Q96H35 190 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 ZNF597Q96LX8 424 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 TRIB1Q96RU8 372 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 UGT2B28Q9BY64 529 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 WWTR1Q9GZV5 400 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 L2HGDHQ9H9P8 463 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 UBTD1Q9HAC8 227 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 SPACA6W5XKT8 324 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 MED12Q93074 2177 aa10.66□□□□□ -0.7
CACNA1C-228ENST00000492150 FAM95CA0A1B0GW59 222 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 CASKO14936 926 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 SH3BGRLO75368 114 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 ALOX15P16050 662 aaPredicted RBP10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 EPORP19235 508 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 ELK3P41970 407 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 HSPA7P48741 367 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 NR1H2P55055 460 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 ATP5J2P56134 94 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 SLC37A1P57057 533 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 HERVK_113P63132 956 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 ERVK-8P63133 956 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 FOXF2Q12947 444 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 BIKQ13323 160 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 ZNF267Q14586 743 aaPredicted RBP10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 EBPQ15125 230 aaKnown RBP10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 SF3B4Q15427 424 aaKnown RBP eCLIP10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 AP5B1Q2VPB7 878 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 SLC29A4Q7RTT9 530 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 ZNF441Q8N8Z8 693 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 C9orf106Q8NAJ2 232 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 DIO2Q92813 273 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 NTNG2Q96CW9 530 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 ART5Q96L15 291 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 GNRHR2Q96P88 292 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 GAL3ST4Q96RP7 486 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 EFCAB11Q9BUY7 163 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 RBM24Q9BX46 236 aaKnown RBP10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 SORBS1Q9BX66 1292 aaKnown RBP10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 ERVK-6Q9BXR3 956 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 CXorf56Q9H5V9 222 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 ESRP2Q9H6T0 727 aaKnown RBP10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 RPF2Q9H7B2 306 aaKnown RBP10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 CALHM2Q9HA72 323 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 WWOXQ9NZC7 414 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 CHMP2BQ9UQN3 213 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 ERVK-19Q9WJR5 959 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 C15orf41Q9Y2V0 281 aa10.65□□□□□ -0.7
CACNA1C-228ENST00000492150 IQANK1A0A1B0GTG1 560 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms