RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 VPS29Q9UBQ0 182 aa28.94■■■□□ 2.22
LDB1-204ENST00000490751 CELSR2Q9HCU4 2923 aa28.94■■■□□ 2.22
LDB1-204ENST00000490751 ZNF407Q9C0G0 2248 aa28.94■■■□□ 2.22
LDB1-204ENST00000490751 NOTCH2Q04721 2471 aa28.94■■■□□ 2.22
LDB1-204ENST00000490751 C1orf226A1L170 272 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 FOXO6A8MYZ6 492 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 E9PLN8 166 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 ADAM10O14672 748 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 HSD3B1P14060 373 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 AGAP20933 346 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 NT5EP21589 574 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 HSD3B2P26439 372 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 SLC48A1Q6P1K1 146 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 PAOXQ6QHF9 649 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 MMP21Q8N119 569 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 EID3Q8N140 333 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 TMEM251Q8N6I4 163 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 PHF10Q8WUB8 498 aaKnown RBP28.93■■■□□ 2.22
LDB1-204ENST00000490751 TM4SF18Q96CE8 201 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 VKORC1Q9BQB6 163 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 SH2D2AQ9NP31 389 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 TUBA8Q9NY65 449 aaPredicted RBP28.93■■■□□ 2.22
LDB1-204ENST00000490751 CES1P1Q9UKY3 287 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 EMCNQ9ULC0 261 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 STK38LQ9Y2H1 464 aa28.93■■■□□ 2.22
LDB1-204ENST00000490751 C2orf92A0A1B0GVN3 265 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 HNRNPRO43390 633 aaKnown RBP28.92■■■□□ 2.22
LDB1-204ENST00000490751 GLRA3O75311 464 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 FBXO45P0C2W1 286 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 CHN1P15882 459 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 PORP16435 677 aaPredicted RBP28.92■■■□□ 2.22
LDB1-204ENST00000490751 HTR1EP28566 365 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 PIGAP37287 484 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 SLCO1A2P46721 670 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 FUT7Q11130 342 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 FOXO1Q12778 655 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 CSTF3Q12996 717 aaKnown RBP28.92■■■□□ 2.22
LDB1-204ENST00000490751 LCP2Q13094 533 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 C6orf163Q5TEZ5 329 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 SLC22A10Q63ZE4 541 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 DND1Q8IYX4 353 aaKnown RBP28.92■■■□□ 2.22
LDB1-204ENST00000490751 PAQR8Q8TEZ7 354 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 MARVELD3Q96A59 401 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 DMRTA2Q96SC8 542 aa28.92■■■□□ 2.22
LDB1-204ENST00000490751 TEX15Q9BXT5 2789 aa28.91■■■□□ 2.22
LDB1-204ENST00000490751 ULK1O75385 1050 aa28.91■■■□□ 2.22
LDB1-204ENST00000490751 SERPINB3P29508 390 aa28.91■■■□□ 2.22
LDB1-204ENST00000490751 DEKP35659 375 aaKnown RBP28.91■■■□□ 2.22
LDB1-204ENST00000490751 MAGEA5P43359 124 aa28.91■■■□□ 2.22
LDB1-204ENST00000490751 HTR6P50406 440 aa28.91■■■□□ 2.22
LDB1-204ENST00000490751 PKNOX1P55347 436 aa28.91■■■□□ 2.22
LDB1-204ENST00000490751 PRAMEF20Q5VT98 475 aa28.91■■■□□ 2.22
LDB1-204ENST00000490751 TAGAPQ8N103 731 aa28.91■■■□□ 2.22
LDB1-204ENST00000490751 FAM109AQ8N4B1 249 aa28.91■■■□□ 2.22
LDB1-204ENST00000490751 ZNF441Q8N8Z8 693 aa28.91■■■□□ 2.22
LDB1-204ENST00000490751 FAM13CQ8NE31 585 aa28.91■■■□□ 2.22
LDB1-204ENST00000490751 CHTF18Q8WVB6 975 aa28.91■■■□□ 2.22
LDB1-204ENST00000490751 GSTO2Q9H4Y5 243 aa28.91■■■□□ 2.22
LDB1-204ENST00000490751 RYDENQ9NUL5 291 aaKnown RBP28.91■■■□□ 2.22
LDB1-204ENST00000490751 GOLGA6L10A6NI86 522 aa28.9■■■□□ 2.22
LDB1-204ENST00000490751 ERAL1O75616 437 aaKnown RBP28.9■■■□□ 2.22
LDB1-204ENST00000490751 CDSNQ15517 529 aa28.9■■■□□ 2.22
LDB1-204ENST00000490751 ZNF630Q2M218 657 aaPredicted RBP28.9■■■□□ 2.22
LDB1-204ENST00000490751 HLA-DQA1Q5Y7H0 255 aa28.9■■■□□ 2.22
LDB1-204ENST00000490751 ZNF615Q8N8J6 731 aa28.9■■■□□ 2.22
LDB1-204ENST00000490751 OR10G3Q8NGC4 313 aa28.9■■■□□ 2.22
LDB1-204ENST00000490751 FAIM2Q9BWQ8 316 aa28.9■■■□□ 2.22
LDB1-204ENST00000490751 ACPTQ9BZG2 426 aa28.9■■■□□ 2.22
LDB1-204ENST00000490751 OR10A5Q9H207 317 aa28.9■■■□□ 2.22
LDB1-204ENST00000490751 HRH3Q9Y5N1 445 aa28.9■■■□□ 2.22
LDB1-204ENST00000490751 LIPGQ9Y5X9 500 aa28.9■■■□□ 2.22
LDB1-204ENST00000490751 SEC23IPQ9Y6Y8 1000 aaKnown RBP28.9■■■□□ 2.22
LDB1-204ENST00000490751 ITPR2Q14571 2701 aa28.9■■■□□ 2.22
LDB1-204ENST00000490751 DNAJC13O75165 2243 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 SMIM23A6NLE4 172 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 G3V2L1 256 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 ENO1P06733 434 aaKnown RBP28.89■■■□□ 2.22
LDB1-204ENST00000490751 MYL2P10916 166 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 KRT15P19012 456 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 TNFRSF8P28908 595 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 FEN1P39748 380 aaKnown RBP28.89■■■□□ 2.22
LDB1-204ENST00000490751 ALDH9A1P49189 494 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 TRA2BP62995 288 aaKnown RBP28.89■■■□□ 2.22
LDB1-204ENST00000490751 HYAL4Q2M3T9 481 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 ZYG11AQ6WRX3 759 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 SH2D5Q6ZV89 423 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 FBXW8Q8N3Y1 598 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 CCNYL1Q8N7R7 359 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 GBP7Q8N8V2 638 aaPredicted RBP28.89■■■□□ 2.22
LDB1-204ENST00000490751 TP53INP1Q96A56 240 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 KLHL29Q96CT2 875 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 CCDC126Q96EE4 140 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 KCNA7Q96RP8 456 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 MCM8Q9UJA3 840 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 TIMM22Q9Y584 194 aa28.89■■■□□ 2.22
LDB1-204ENST00000490751 CHCHD2Q9Y6H1 151 aaPredicted RBP28.89■■■□□ 2.22
LDB1-204ENST00000490751 CLDN14O95500 239 aa28.88■■■□□ 2.21
LDB1-204ENST00000490751 ESRRBO95718 433 aa28.88■■■□□ 2.21
LDB1-204ENST00000490751 KCNJ2P63252 427 aa28.88■■■□□ 2.21
LDB1-204ENST00000490751 NTRK2Q16620 822 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms