RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 PPANQ9NQ55 473 aaKnown RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 QPCTLQ9NXS2 382 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 POLDIP2Q9Y2S7 368 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 SH3GLB1Q9Y371 365 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 YIPF1Q9Y548 306 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 N6AMT1Q9Y5N5 214 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 MYH13Q9UKX3 1938 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 CNTNAP2Q9UHC6 1331 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 GSTTP1A0A1W2PQM5 241 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 MAGEB16A2A368 324 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 EIF4E1BA6NMX2 242 aaKnown RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 HNRNPCL2B2RXH8 293 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 PRSS46E5RG02 174 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 E9PQ18 207 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 BCAS1O75363 584 aaPredicted RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 SORBS2O94875 1100 aaKnown RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 FAM107AO95990 144 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 LYNP07948 512 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 ZNF43P17038 809 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 PROZP22891 400 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 MATR3P43243 847 aaKnown RBP eCLIP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 ABCG1P45844 678 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 NSFP46459 744 aaKnown RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 SUCLG1P53597 346 aaKnown RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 XRCC4Q13426 336 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 HAGHQ16775 308 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 TMEM44Q2T9K0 475 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 XKR3Q5GH77 459 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 ZNF776Q68DI1 518 aaPredicted RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 ATRAIDQ6UW56 229 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 NAGSQ8N159 534 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 ARHGAP18Q8N392 663 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 LNX1Q8TBB1 728 aaPredicted RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 PPP4R1Q8TF05 950 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 KIFAP3Q92845 792 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 HAVCR1Q96D42 359 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 ZNF582Q96NG8 517 aaPredicted RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 CDCA3Q99618 268 aaPredicted RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 NAPGQ99747 312 aaPredicted RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 ZNF670Q9BS34 389 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 IFT27Q9BW83 186 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 SLC2A11Q9BYW1 496 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 TMEM117Q9H0C3 514 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 STMN4Q9H169 189 aaPredicted RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 C12orf65Q9H3J6 166 aaKnown RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 TOR3AQ9H497 397 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 IL36AQ9UHA7 158 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 CIDEBQ9UHD4 219 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 PRELID1Q9Y255 219 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 L3MBTL1Q9Y468 752 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 RNF114Q9Y508 228 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 A0A1W2PPI3 338 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 DPPA5A6NC42 116 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 ACOD1A6NK06 481 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 TCP11X1B4DZS4 312 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 PLK4O00444 970 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 CLDN5O00501 218 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 XPNPEP2O43895 674 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 TSPAN2O60636 221 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 PFKFB2O60825 505 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 UFL1O94874 794 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 IL1BP01584 269 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 GCP02774 474 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 GSTA2P09210 222 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 NHLRC4P0CG21 123 aaPredicted RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 CEBPBP17676 345 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 ELF3P78545 371 aaPredicted RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 CNTN2Q02246 1040 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 KEAP1Q14145 624 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 KIR2DS3Q14952 304 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 ZNF77Q15935 545 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 C6orf226Q5I0X4 101 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 EFHC1Q5JVL4 640 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 C1orf220Q5T0J3 134 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 SLC22A9Q8IVM8 553 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 SLC44A3Q8N4M1 653 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 MARVELD2Q8N4S9 558 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 OR2AK2Q8NG84 335 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 ELMO1Q92556 727 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 PNPLA2Q96AD5 504 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 HAUS1Q96CS2 278 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 CCT8L2Q96SF2 557 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 AIFM2Q9BRQ8 373 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 ALG12Q9BV10 488 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 OSBPL10Q9BXB5 764 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 KRTAP17-1Q9BYP8 105 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 DNTTIP1Q9H147 329 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 METTL7AQ9H8H3 244 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 FAM114A2Q9NRY5 505 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 VPS4AQ9UN37 437 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 EIF3LQ9Y262 564 aaKnown RBP2.66□□□□□ -1.98
UBXN4-208ENST00000490163 LRP12Q9Y561 859 aa2.66□□□□□ -1.98
UBXN4-208ENST00000490163 FER1L6Q2WGJ9 1857 aa2.65□□□□□ -1.98
UBXN4-208ENST00000490163 TIAM2Q8IVF5 1701 aa2.65□□□□□ -1.98
UBXN4-208ENST00000490163 TRAV25A0A0B4J276 109 aa2.65□□□□□ -1.98
UBXN4-208ENST00000490163 SRRM3A6NNA2 597 aaPredicted RBP2.65□□□□□ -1.98
UBXN4-208ENST00000490163 B4DGG1 531 aa2.65□□□□□ -1.98
UBXN4-208ENST00000490163 SLC22A2O15244 555 aa2.65□□□□□ -1.98
UBXN4-208ENST00000490163 PSMD3O43242 534 aa2.65□□□□□ -1.98
UBXN4-208ENST00000490163 GSRP00390 522 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms