RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 DENND5AQ6IQ26 1287 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 LEG1Q6P5S2 330 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 CYS1Q717R9 158 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 TRIM42Q8IWZ5 723 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 GPALPP1Q8IXQ4 340 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 LRRC34Q8IZ02 419 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 OR4N4Q8N0Y3 316 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 ZNF567Q8N184 647 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 PHC3Q8NDX5 983 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 GABPB2Q8TAK5 448 aaPredicted RBP6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 ZCCHC10Q8TBK6 192 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 NSMCE1Q8WV22 266 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 DCAKDQ8WVC6 231 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 UCN3Q969E3 161 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 ZNF317Q96PQ6 595 aaPredicted RBP6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 TM9SF2Q99805 663 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 SLC39A3Q9BRY0 314 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 LRRC40Q9H9A6 602 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 ARNT2Q9HBZ2 717 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 FAIMQ9NVQ4 179 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 CAMK2AQ9UQM7 478 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 DTX4Q9Y2E6 619 aa6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 AAR2Q9Y312 384 aaKnown RBP6.74□□□□□ -1.33
EXOSC3-206ENST00000489414 A0A1W2PNV4 684 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 LRP5LA4QPB2 252 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 A8MVJ9 347 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 ISM1B1AKI9 464 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 TRIM49D1C9J1S8 452 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 H0YHG0 523 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 KCNK1O00180 336 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 COPEO14579 308 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 FOXS1O43638 330 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 AP2A1O95782 977 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 MPIG6BO95866 241 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 TPBGLP0DKB5 382 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 PPP3CBP16298 524 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 PTPN3P26045 913 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 ALDH3A1P30838 453 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 BCL6P41182 706 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 TRPC1P48995 793 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 NPY2RP49146 381 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 SSR4P51571 173 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 GEMP55040 296 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 CORO7P57737 925 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 SESN2P58004 480 aaPredicted RBP6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 KCNJ2P63252 427 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 WASHC5Q12768 1159 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 EFTUD2Q15029 972 aaKnown RBP eCLIP6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 TAF9Q16594 264 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 PDK4Q16654 411 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 ZSWIM7Q19AV6 140 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 IQCCQ4KMZ1 466 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 TEX44Q53QW1 395 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 DMRTC1Q5HYR2 192 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 SPANXN3Q5MJ09 141 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 XP32Q5T750 250 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 MFSD4BQ5TF39 518 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 STEAP4Q687X5 459 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 ZNF449Q6P9G9 518 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 CCDC91Q7Z6B0 441 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 IGDCC3Q8IVU1 814 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 C4orf33Q8N1A6 199 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 GBP7Q8N8V2 638 aaPredicted RBP6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 KCTD4Q8WVF5 259 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 DDB2Q92466 427 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 TP53INP1Q96A56 240 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 ZBTB8AQ96BR9 441 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 STARD4Q96DR4 205 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 APOPT1Q96IL0 206 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 SIGLEC10Q96LC7 697 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 TSGA13Q96PP4 275 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 ELAC2Q9BQ52 826 aaKnown RBP6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 AARSD1Q9BTE6 412 aaKnown RBP6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 TDRD1Q9BXT4 1180 aaKnown RBP6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 TRIM2Q9C040 744 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 OR52A5Q9H2C5 316 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 ZMAT3Q9HA38 289 aaKnown RBP6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 NTN4Q9HB63 628 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 RAD18Q9NS91 495 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 FGFR1OP2Q9NVK5 253 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 HPF1Q9NWY4 346 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 NSMCE4AQ9NXX6 385 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 KLHL14Q9P2G3 628 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 PRDM4Q9UKN5 801 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 CHKBQ9Y259 395 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 ARL2BPQ9Y2Y0 163 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 TTLL3Q9Y4R7 772 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 U3KQK5 164 aa6.73□□□□□ -1.33
EXOSC3-206ENST00000489414 SCN3AQ9NY46 2000 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 A0A1W2PPM1 405 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 FAM159BA6NKW6 160 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 H7C417 338 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 K7EIL1 84 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 LY6HO94772 140 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 BCL10O95999 233 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 TROVE2P10155 538 aaKnown RBP eCLIP6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 EZRP15311 586 aaKnown RBP6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 PTNP21246 168 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 MGAT1P26572 445 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 RPA3P35244 121 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms