RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 CFL2Q9Y281 166 aa11.6□□□□□ -0.55
COL4A5-206ENST00000489230 USH1CQ9Y6N9 552 aa11.6□□□□□ -0.55
COL4A5-206ENST00000489230 DYTNA2CJ06 578 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 GABRR3A8MPY1 467 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 MYO1GB0I1T2 1018 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 TCP11X1B4DZS4 312 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 FCHO1O14526 889 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 DDAH2O95865 285 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 ITGAMP11215 1152 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 NT5EP21589 574 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 TACR1P25103 407 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 NTSP30990 170 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 CLDN8P56748 225 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 C21orf58P58505 322 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 ZNF267Q14586 743 aaPredicted RBP11.59□□□□□ -0.55
COL4A5-206ENST00000489230 CEBPEQ15744 281 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 ACER2Q5QJU3 275 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 CPTPQ5TA50 214 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 FAM219BQ5XKK7 198 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 NXNQ6DKJ4 435 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 EPGNQ6UW88 154 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 IGFL2Q6UWQ7 119 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 CCDC116Q8IYX3 515 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 ARMC10Q8N2F6 343 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 HORMAD2Q8N7B1 307 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 APCDD1LQ8NCL9 501 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 VPS37AQ8NEZ2 397 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 ZFP28Q8NHY6 868 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 BRIX1Q8TDN6 353 aaKnown RBP11.59□□□□□ -0.55
COL4A5-206ENST00000489230 PSMF1Q92530 271 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 HAS2Q92819 552 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 UCN3Q969E3 161 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 NCLNQ969V3 563 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 CNRIP1Q96F85 164 aaPredicted RBP11.59□□□□□ -0.55
COL4A5-206ENST00000489230 MAELQ96JY0 434 aaKnown RBP11.59□□□□□ -0.55
COL4A5-206ENST00000489230 EGLN2Q96KS0 407 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 PPP1R36Q96LQ0 422 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 NUDT9Q9BW91 350 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 RNF32Q9H0A6 362 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 SH3BP4Q9P0V3 963 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 PTGFRNQ9P2B2 879 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 ATP6V1HQ9UI12 483 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 PTPN13Q12923 2485 aa11.59□□□□□ -0.55
COL4A5-206ENST00000489230 NUP210LQ5VU65 1888 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 TRBV11-1A0A0K0K1C0 115 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 MYOCOSA0A1B0GUC4 107 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 SDHDO14521 159 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 AKAP10O43572 662 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 DIAPH2O60879 1101 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 JUNP05412 331 aaKnown RBP11.58□□□□□ -0.56
COL4A5-206ENST00000489230 IFI6P09912 130 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 G6PDP11413 515 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 IDO1P14902 403 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 EPHA3P29320 983 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 SOX11P35716 441 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 MDH1P40925 334 aaKnown RBP11.58□□□□□ -0.56
COL4A5-206ENST00000489230 CLNS1AP54105 237 aaKnown RBP11.58□□□□□ -0.56
COL4A5-206ENST00000489230 SRSF11Q05519 484 aaKnown RBP11.58□□□□□ -0.56
COL4A5-206ENST00000489230 FUT7Q11130 342 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 PDE7AQ13946 482 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 GSTA3Q16772 222 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 LSM12Q3MHD2 195 aaKnown RBP11.58□□□□□ -0.56
COL4A5-206ENST00000489230 RNF111Q6ZNA4 994 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 SLC29A4Q7RTT9 530 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 LURAP1LQ8IV03 231 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 SLC15A4Q8N697 577 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 TEX19Q8NA77 164 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 ZNF675Q8TD23 568 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 ZNF721Q8TF20 911 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 STON2Q8WXE9 905 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 ZBED6CLQ96FA7 236 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-206ENST00000489230 CCDC28BQ9BUN5 200 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 C1orf50Q9BV19 199 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 CNPPD1Q9BV87 410 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 DPY30Q9C005 99 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 CDCP1Q9H5V8 836 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 CCDC134Q9H6E4 229 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 SLCO1B3Q9NPD5 702 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 ACSS1Q9NUB1 689 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-206ENST00000489230 PRODH2Q9UF12 536 aa11.58□□□□□ -0.56
COL4A5-206ENST00000489230 YARS2Q9Y2Z4 477 aaKnown RBP11.58□□□□□ -0.56
COL4A5-206ENST00000489230 MASP2O00187 686 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 ZNF195O14628 629 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 UBDO15205 165 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 POLR3GO15318 223 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-206ENST00000489230 PDPK1O15530 556 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 EDF1O60869 148 aaKnown RBP11.57□□□□□ -0.56
COL4A5-206ENST00000489230 LRATO95237 230 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 IGKV3-11P04433 115 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 CASRP41180 1078 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 NCBP2P52298 156 aaKnown RBP eCLIP11.57□□□□□ -0.56
COL4A5-206ENST00000489230 MANFP55145 182 aaKnown RBP11.57□□□□□ -0.56
COL4A5-206ENST00000489230 MLF1P58340 268 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 DCAF7P61962 342 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 RNF4P78317 190 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 PSPHP78330 225 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 TLE1Q04724 770 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 LRRC74AQ0VAA2 488 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 KLRB1Q12918 225 aa11.57□□□□□ -0.56
COL4A5-206ENST00000489230 RAPSNQ13702 412 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms