RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 LRRC23Q53EV4 343 aaPredicted RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 INTS11Q5TA45 600 aaKnown RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 PWWP2BQ6NUJ5 590 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 TNFAIP8L2Q6P589 184 aaPredicted RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 CEACAM20Q6UY09 585 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 PTOV1Q86YD1 416 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 SLC30A8Q8IWU4 369 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 GALNT12Q8IXK2 581 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 C10orf111Q8N326 155 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 ENDOVQ8N8Q3 282 aaKnown RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 NUP43Q8NFH3 380 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 ADCY4Q8NFM4 1077 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 POP5Q969H6 163 aaKnown RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 ANKRD9Q96BM1 317 aaPredicted RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 ELP4Q96EB1 424 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 DGAT2Q96PD7 388 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 CMKLR1Q99788 373 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 CHST8Q9H2A9 424 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 TMEM38AQ9H6F2 299 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 GORASP2Q9H8Y8 452 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 MKKSQ9NPJ1 570 aaPredicted RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 EQTNQ9NQ60 294 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 OCIAD1Q9NX40 245 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 STX18Q9P2W9 335 aaKnown RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 MMACHCQ9Y4U1 282 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 TMEM184BQ9Y519 407 aaPredicted RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 PLOD2O00469 737 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 DYRK3O43781 588 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 COQ9O75208 318 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 TNFRSF21O75509 655 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 CREG1O75629 220 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 IFNA16P05015 189 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 IFI6P09912 130 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 NUDT7P0C024 238 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 ARAFP10398 606 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 UMPSP11172 480 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 FGF5P12034 268 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 ANPEPP15144 967 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 MAOAP21397 527 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 SLC7A1P30825 629 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 DCDP81605 110 aaKnown RBP9.39□□□□□ -0.91
USP11-211ENST00000489111 MRPS35P82673 323 aaKnown RBP9.39□□□□□ -0.91
USP11-211ENST00000489111 MC2RQ01718 297 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 SCARB2Q14108 478 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 VEZF1Q14119 521 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 ERV3-1Q14264 604 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 GNA13Q14344 377 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 LASP1Q14847 261 aaKnown RBP9.39□□□□□ -0.91
USP11-211ENST00000489111 ADRM1Q16186 407 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 NKAIN1Q4KMZ8 207 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 FAM98BQ52LJ0 330 aaKnown RBP9.39□□□□□ -0.91
USP11-211ENST00000489111 ZNF628Q5EBL2 1059 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 TBCELQ5QJ74 424 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 STPG1Q5TH74 334 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 ZC3H7AQ8IWR0 971 aaKnown RBP9.39□□□□□ -0.91
USP11-211ENST00000489111 ST13P4Q8IZP2 240 aaPredicted RBP9.39□□□□□ -0.91
USP11-211ENST00000489111 SHISA5Q8N114 240 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 EID3Q8N140 333 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 OR2L13Q8N349 312 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 VWA5B2Q8N398 1253 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 HORMAD2Q8N7B1 307 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 C7orf57Q8NEG2 295 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 OR7G2Q8NG99 324 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 NFKBIDQ8NI38 313 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 ZNF675Q8TD23 568 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 MAL2Q969L2 176 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 RNF31Q96EP0 1072 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 RBM18Q96H35 190 aaKnown RBP9.39□□□□□ -0.91
USP11-211ENST00000489111 RNF145Q96MT1 663 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 CTRCQ99895 268 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 ALOXE3Q9BYJ1 711 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 A4GALTQ9NPC4 353 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 C14orf105Q9NVL8 296 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 STOML1Q9UBI4 398 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 P2RX2Q9UBL9 471 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 NKX1-2Q9UD57 310 aaPredicted RBP9.39□□□□□ -0.91
USP11-211ENST00000489111 ANAPC2Q9UJX6 822 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 RPS6KA6Q9UK32 745 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 AURKCQ9UQB9 309 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 LOXL2Q9Y4K0 774 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 AP4S1Q9Y587 144 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 PCDHGA1Q9Y5H4 931 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 V9GYQ6 96 aa9.39□□□□□ -0.91
USP11-211ENST00000489111 A0A087WV62 115 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 TCRBV5S2A0A599 114 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 SYNDIG1LA6NDD5 238 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 B4E171 279 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 H3BNX3 289 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 UPK1AO00322 258 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 SLC28A2O43868 658 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 PLOD3O60568 738 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 JRKO75564 520 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 TIAF1O95411 115 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 ZNF682O95780 498 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 SERPINA1P01009 418 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 HMGN2P05204 90 aaKnown RBP9.38□□□□□ -0.91
USP11-211ENST00000489111 BCHEP06276 602 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 BMP2P12643 396 aa9.38□□□□□ -0.91
USP11-211ENST00000489111 HOXB6P17509 224 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms