RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ZNF441Q8N8Z8 693 aa14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 PSD4Q8NDX1 1056 aa14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 CTHRC1Q96CG8 243 aa14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 CNRIP1Q96F85 164 aaPredicted RBP14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 ZIM3Q96PE6 472 aa14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 FAIM2Q9BWQ8 316 aa14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 WWTR1Q9GZV5 400 aa14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 HPF1Q9NWY4 346 aa14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 SENP1Q9P0U3 644 aa14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 ZNF639Q9UID6 485 aa14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 ERVK-11Q9UQG0 969 aa14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 OSGIN2Q9Y236 505 aa14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 KLF13Q9Y2Y9 288 aaPredicted RBP14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 PTGDR2Q9Y5Y4 395 aa14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 HIVEP3Q5T1R4 2406 aa14.75□□□□□ -0.05
CTDSP1-209ENST00000488627 SVILO95425 2214 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 OR6C76A6NM76 312 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 AZIN1O14977 448 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 NPHS1O60500 1241 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 ERAL1O75616 437 aaKnown RBP14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 RSL1D1O76021 490 aaKnown RBP14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 UNC5CO95185 931 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 BPGMP07738 259 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 ANXA4P09525 319 aaPredicted RBP14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 CSNK2A2P19784 350 aaPredicted RBP14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 NT5EP21589 574 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 PRPH2P23942 346 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 PTGER1P34995 402 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 DEKP35659 375 aaKnown RBP14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 ALDH6A1Q02252 535 aaKnown RBP14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 MAP4K2Q12851 820 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 DUSP8Q13202 625 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 PRSS53Q2L4Q9 553 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 SPDYAQ5MJ70 313 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 KANK2Q63ZY3 851 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 FAM111BQ6SJ93 734 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 OPN5Q6U736 354 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 RNF111Q6ZNA4 994 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 SLC15A4Q8N697 577 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 ZFP62Q8NB50 900 aaPredicted RBP14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 FAM98AQ8NCA5 519 aaKnown RBP14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 C16orf52Q8NHV5 167 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 SGCZQ96LD1 299 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 GPR137Q96N19 417 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 EBPLQ9BY08 206 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 SH2D2AQ9NP31 389 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 TIMMDC1Q9NPL8 285 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 RRAGDQ9NQL2 400 aaPredicted RBP14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 MAT2BQ9NZL9 334 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 SEC14L3Q9UDX4 400 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 UTS2RQ9UKP6 389 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 PSME2Q9UL46 239 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 EXO1Q9UQ84 846 aaKnown RBP14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 SLC5A6Q9Y289 635 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 DNAJC15Q9Y5T4 150 aa14.74□□□□□ -0.05
CTDSP1-209ENST00000488627 DOPEY2Q9Y3R5 2298 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 GNG14A0A1W2PPG7 69 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 PINLYPA6NC86 204 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 GOLGA6L10A6NI86 522 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 NPIPA5E9PKD4 350 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 KLRC4-KLRK1H3BQV0 150 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 RGS16O15492 202 aaPredicted RBP14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 CRCPO75575 148 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 LDLRP01130 860 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 GSTM5P46439 218 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 ALDH9A1P49189 494 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 MEOX1P50221 254 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 GPR85P60893 370 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 MPP2Q14168 576 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 CEBPEQ15744 281 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 KRTCAP3Q53RY4 240 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 CEP85LQ5SZL2 805 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 CES4AQ5XG92 561 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 RTL4Q6ZR62 310 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 ZCCHC23Q6ZST2 131 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 SLC29A4Q7RTT9 530 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 CHERPQ8IWX8 916 aaKnown RBP14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 GOLM1Q8NBJ4 401 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 POGLUT1Q8NBL1 392 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 SIMC1Q8NDZ2 872 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 OR7G1Q8NGA0 311 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 OR2T11Q8NH01 316 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 FAM76AQ8TAV0 307 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 SSC4DQ8WTU2 575 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 ADIPOR1Q96A54 375 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 ZBTB9Q96C00 473 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 KLHL29Q96CT2 875 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 TSPAN10Q9H1Z9 355 aaPredicted RBP14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 OR10A5Q9H207 317 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 NPIPA1Q9UND3 350 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 TRAF6Q9Y4K3 522 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 HECTD1Q9ULT8 2610 aa14.73□□□□□ -0.05
CTDSP1-209ENST00000488627 A0A0G2JMM0 328 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 A0A1W2PPB8 328 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 A0A1W2PRS3 328 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 KIR3DP1A8MWS1 328 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 TMEM233B4DJY2 109 aa14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 CTIFO43310 598 aaKnown RBP14.72□□□□□ -0.05
CTDSP1-209ENST00000488627 ASNA1O43681 348 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms