RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 C12orf65Q9H3J6 166 aaKnown RBP16.39■□□□□ 0.21
ITGB1-215ENST00000488494 MID1IP1Q9NPA3 183 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 SACM1LQ9NTJ5 587 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 TIMM22Q9Y584 194 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 A0A1B0GTH9 108 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 GOLGA6L10A6NI86 522 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 UBFD1O14562 309 aaKnown RBP16.38■□□□□ 0.21
ITGB1-215ENST00000488494 COPEO14579 308 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 PCDH7O60245 1069 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 CDH16O75309 829 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 ERAL1O75616 437 aaKnown RBP16.38■□□□□ 0.21
ITGB1-215ENST00000488494 P04436 131 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 ESRRAP11474 423 aaPredicted RBP16.38■□□□□ 0.21
ITGB1-215ENST00000488494 KRT4P19013 534 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 DNASE1L1P49184 302 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 PPIAP62937 165 aaKnown RBP16.38■□□□□ 0.21
ITGB1-215ENST00000488494 CCDC153Q494R4 210 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 RPTNQ6XPR3 784 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 C3P1Q6ZMU1 363 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 FRMD7Q6ZUT3 714 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 SLC15A4Q8N697 577 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 GBP7Q8N8V2 638 aaPredicted RBP16.38■□□□□ 0.21
ITGB1-215ENST00000488494 CCDC63Q8NA47 563 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 FAM13CQ8NE31 585 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 OR52N2Q8NGI0 321 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 OR2W6PQ8NHA6 318 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 TM4SF18Q96CE8 201 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 FAIM2Q9BWQ8 316 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 CES1P1Q9UKY3 287 aa16.38■□□□□ 0.21
ITGB1-215ENST00000488494 CCDC151A5D8V7 595 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 GLSO94925 669 aaPredicted RBP16.37■□□□□ 0.21
ITGB1-215ENST00000488494 FBXO45P0C2W1 286 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 PORP16435 677 aaPredicted RBP16.37■□□□□ 0.21
ITGB1-215ENST00000488494 CNR1P21554 472 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 CRHR1P34998 444 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 DEKP35659 375 aaKnown RBP16.37■□□□□ 0.21
ITGB1-215ENST00000488494 PIGAP37287 484 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 FEN1P39748 380 aaKnown RBP16.37■□□□□ 0.21
ITGB1-215ENST00000488494 CCT5P48643 541 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 NR0B1P51843 470 aaKnown RBP16.37■□□□□ 0.21
ITGB1-215ENST00000488494 NAGLUP54802 743 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 FOXA1P55317 472 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 ADORA2A-AS1P86434 159 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 ACSM2AQ08AH3 577 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 SPIN4Q56A73 249 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 ACSM2BQ68CK6 577 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 FAM180BQ6P0A1 224 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 SCIMPQ6UWF3 145 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 NCCRP1Q6ZVX7 275 aaPredicted RBP16.37■□□□□ 0.21
ITGB1-215ENST00000488494 MRGPRGQ86SM5 289 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 CD163Q86VB7 1156 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 SLC22A16Q86VW1 577 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 VWA5B2Q8N398 1253 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 ZNF441Q8N8Z8 693 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 OR10G3Q8NGC4 313 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 RDH11Q8TC12 318 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 CHTF18Q8WVB6 975 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 EBPLQ9BY08 206 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 DEFB127Q9H1M4 99 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 MCM8Q9UJA3 840 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 GRID1Q9ULK0 1009 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 MEMO1Q9Y316 297 aa16.37■□□□□ 0.21
ITGB1-215ENST00000488494 C2orf92A0A1B0GVN3 265 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 GNG14A0A1W2PPG7 69 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 PRSS44E7EML9 344 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 PRRG2O14669 202 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 PDE9AO76083 593 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 LRATO95237 230 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 ATP1B1P05026 303 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 TPOP07202 933 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 IL3P08700 152 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 TIA1P31483 386 aaKnown RBP eCLIP16.36■□□□□ 0.212e-7■□□□□ 10.4
ITGB1-215ENST00000488494 PTGS2P35354 604 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 TRA2BP62995 288 aaKnown RBP16.36■□□□□ 0.21
ITGB1-215ENST00000488494 RAE1P78406 368 aaKnown RBP16.36■□□□□ 0.21
ITGB1-215ENST00000488494 DUSP2Q05923 314 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 FUT7Q11130 342 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 CFAP157Q5JU67 520 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 PRAMEF20Q5VT98 475 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 HLA-DQA1Q5Y7H0 255 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 TMEM64Q6YI46 380 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 DND1Q8IYX4 353 aaKnown RBP16.36■□□□□ 0.21
ITGB1-215ENST00000488494 ZNF808Q8N4W9 903 aaPredicted RBP16.36■□□□□ 0.21
ITGB1-215ENST00000488494 ZNF615Q8N8J6 731 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 OR5M3Q8NGP4 307 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 APIPQ96GX9 242 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 PHF12Q96QT6 1004 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 BRINP2Q9C0B6 783 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 OR10A5Q9H207 317 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 ZDHHC11Q9H8X9 412 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 SH2D2AQ9NP31 389 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 PLSCR2Q9NRY7 297 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 TUBA8Q9NY65 449 aaPredicted RBP16.36■□□□□ 0.21
ITGB1-215ENST00000488494 HEY2Q9UBP5 337 aa16.36■□□□□ 0.21
ITGB1-215ENST00000488494 TLDC2A0PJX2 215 aa16.35■□□□□ 0.21
ITGB1-215ENST00000488494 CRCPO75575 148 aa16.35■□□□□ 0.21
ITGB1-215ENST00000488494 CPA3P15088 417 aa16.35■□□□□ 0.21
ITGB1-215ENST00000488494 CSNK2A2P19784 350 aaPredicted RBP16.35■□□□□ 0.21
ITGB1-215ENST00000488494 SERPINB3P29508 390 aa16.35■□□□□ 0.21
ITGB1-215ENST00000488494 MAGEA5P43359 124 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms