RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 LOC101059948A0A1B0GTJ6 334 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 C13orf42A0A1B0GVH6 325 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 FEZF1A0PJY2 475 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 ANKRD61A6NGH8 418 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 ANKDD1BA6NHY2 528 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 GABRR3A8MPY1 467 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 HIP1O00291 1037 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 ZNF197O14709 1029 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 RNASEH1O60930 286 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 SNNO75324 88 aaPredicted RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 TRMUO75648 421 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 SORBS2O94875 1100 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 CDK14O94921 469 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 AP2A2O94973 939 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 CXCL10P02778 98 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 HMBSP08397 361 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 OR2T7P0C7T2 308 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 FAM157CP0CG43 387 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 TCF4P15884 667 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 NCF2P19878 526 aaPredicted RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 PTNP21246 168 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 CA4P22748 312 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 TIA1P31483 386 aaKnown RBP eCLIP2.8□□□□□ -1.96
RBM28-207ENST00000488249 ALDH3B1P43353 468 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 SLC9A3P48764 834 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 HNRNPFP52597 415 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 PDX1P52945 283 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 CDH13P55290 713 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 B3GALT5-AS1P59052 145 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 MAPRE2Q15555 327 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 MAPK11Q15759 364 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 IQCCQ4KMZ1 466 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 ZNF311Q5JNZ3 666 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 ZC2HC1BQ5TFG8 222 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 AGBL2Q5U5Z8 902 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 CARD17Q5XLA6 110 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 PTRHD1Q6GMV3 140 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 TRIM65Q6PJ69 517 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 SCARA5Q6ZMJ2 495 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 TRMT11Q7Z4G4 463 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 SERINC5Q86VE9 423 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 VPS36Q86VN1 386 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 LRRC6Q86X45 466 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 KATNAL2Q8IYT4 538 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 ARHGAP24Q8N264 748 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 COMMD1Q8N668 190 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 ASCC1Q8N9N2 400 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 CCDC63Q8NA47 563 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 OR56B1Q8NGI3 324 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 OR10S1Q8NGN2 331 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 MITD1Q8WV92 249 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 HPSE2Q8WWQ2 592 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 PIBF1Q8WXW3 757 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 IRGQQ8WZA9 623 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 ESAMQ96AP7 390 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 PPP1R14BQ96C90 147 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 SLC41A3Q96GZ6 507 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 MAGED4Q96JG8 741 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 CITED1Q99966 193 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 KCNS3Q9BQ31 491 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 TDRD1Q9BXT4 1180 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 SHCBP1LQ9BZQ2 653 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 GFRA4Q9GZZ7 299 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 DDX47Q9H0S4 455 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 NOL11Q9H8H0 719 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 SRD5A3Q9H8P0 318 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 ANKZF1Q9H8Y5 726 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 MED20Q9H944 212 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 FN3KRPQ9HA64 309 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 TBC1D17Q9HA65 648 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 FGF22Q9HCT0 170 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 MRPL47Q9HD33 250 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 KCNMB3Q9NPA1 279 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 EQTNQ9NQ60 294 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 SDR39U1Q9NRG7 319 aaPredicted RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 INTS9Q9NV88 658 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 TMEM161AQ9NX61 479 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 B3GAT1Q9P2W7 334 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 PEF1Q9UBV8 284 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 UBQLN2Q9UHD9 624 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 IL20RAQ9UHF4 553 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 PACSIN2Q9UNF0 486 aaPredicted RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 SNX7Q9UNH6 387 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 PLA2G4CQ9UP65 541 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 PLCL2Q9UPR0 1127 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 ENTPD4Q9Y227 616 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 PADI2Q9Y2J8 665 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 MRPS28Q9Y2Q9 187 aaKnown RBP2.8□□□□□ -1.96
RBM28-207ENST00000488249 RIPK3Q9Y572 518 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 RNF215Q9Y6U7 377 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 ZHX2Q9Y6X8 837 aa2.8□□□□□ -1.96
RBM28-207ENST00000488249 IGHV4-4A0A075B6R2 117 aa2.79□□□□□ -1.96
RBM28-207ENST00000488249 IQANK1A0A1B0GTG1 560 aa2.79□□□□□ -1.96
RBM28-207ENST00000488249 A0A1W2PPM1 405 aa2.79□□□□□ -1.96
RBM28-207ENST00000488249 MACROD2A1Z1Q3 448 aa2.79□□□□□ -1.96
RBM28-207ENST00000488249 MEIOCA2RUB1 952 aa2.79□□□□□ -1.96
RBM28-207ENST00000488249 TMEM221A6NGB7 291 aa2.79□□□□□ -1.96
RBM28-207ENST00000488249 OR2AG2A6NM03 316 aa2.79□□□□□ -1.96
RBM28-207ENST00000488249 CYSRT1A8MQ03 144 aa2.79□□□□□ -1.96
RBM28-207ENST00000488249 C12orf71A8MTZ7 269 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms