RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 BMP8AQ7Z5Y6 402 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 ZDHHC21Q8IVQ6 265 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 ZC3H7AQ8IWR0 971 aaKnown RBP8.87□□□□□ -0.99
SF3B1-211ENST00000487698 OR4N5Q8IXE1 308 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 OR2L13Q8N349 312 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 GALNT4Q8N4A0 578 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 CBR4Q8N4T8 237 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 TTC29Q8NA56 475 aaPredicted RBP8.87□□□□□ -0.99
SF3B1-211ENST00000487698 OR7G2Q8NG99 324 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 RAB8BQ92930 207 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 GIMAP5Q96F15 307 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 TMEM19Q96HH6 336 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 VPS50Q96JG6 964 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 C7orf34Q96L11 122 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 NUDT22Q9BRQ3 303 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 DOHHQ9BU89 302 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 CLK4Q9HAZ1 481 aaKnown RBP8.87□□□□□ -0.99
SF3B1-211ENST00000487698 C8orf4Q9NR00 106 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 ADPRHL2Q9NX46 363 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 RAB26Q9ULW5 256 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 SLC6A14Q9UN76 642 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF451Q9Y4E5 1061 aa8.87□□□□□ -0.99
SF3B1-211ENST00000487698 ASCC3Q8N3C0 2202 aaKnown RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 EME2A4GXA9 379 aaPredicted RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 FAM227AF5H4B4 570 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 PDLIM1O00151 329 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 DLGAP1O14490 977 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 ARHGAP33O14559 1287 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 TOX3O15405 576 aaPredicted RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 SUV39H1O43463 412 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 LDB3O75112 727 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 CST1P01037 141 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 BCHEP06276 602 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 PORP16435 677 aaPredicted RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 NELFEP18615 380 aaKnown RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 MAN2A2P49641 1150 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 CLCN2P51788 898 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 TXNL4AP83876 142 aaKnown RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 VLDLRP98155 873 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 GRM7Q14831 915 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 NRF1Q16656 503 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF628Q5EBL2 1059 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 FHL5Q5TD97 284 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 FAM111BQ6SJ93 734 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 PIWIL3Q7Z3Z3 882 aaKnown RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 TMPRSS9Q7Z410 1059 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 SZRD1Q7Z422 152 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 PATL1Q86TB9 770 aaKnown RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 LGI4Q8N135 537 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 METTL25Q8N6Q8 603 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 OR5D16Q8NGK9 328 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 OR2I1PQ8NGU4 316 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 ADAMTS18Q8TE60 1221 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 KAT2AQ92830 837 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 TMBIM1Q969X1 311 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 ANKRD9Q96BM1 317 aaPredicted RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 SPRTNQ9H040 489 aaPredicted RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF768Q9H5H4 540 aaKnown RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 C3orf14Q9HBI5 128 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 ABCG2Q9UNQ0 655 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 A0A1W2PQM1 296 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 BLACEA4D250 179 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 DENRO43583 198 aaKnown RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 ASNA1O43681 348 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 PCDHGA12O60330 932 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 SLITRK5O94991 958 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 OPN1SWP03999 348 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 FABP3P05413 133 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 RPSAP08865 295 aaKnown RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 OR12D1P0DN82 309 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 RNH1P13489 461 aaKnown RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 MATN1P21941 496 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 AVPR2P30518 371 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 SEPHS1P49903 392 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 IGLV3-21P80748 117 aaPredicted RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 MRPS35P82673 323 aaKnown RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 ID2Q02363 134 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 FUT5Q11128 374 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 LASP1Q14847 261 aaKnown RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 ANGPT1Q15389 498 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 TSEN54Q7Z6J9 526 aaKnown RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 NUP43Q8NFH3 380 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 ZNF675Q8TD23 568 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 MAGED4Q96JG8 741 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 MS4A4EQ96PG1 132 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 ANKRA2Q9H9E1 313 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 HCN3Q9P1Z3 774 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 PTGFRNQ9P2B2 879 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 PDP2Q9P2J9 529 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 P2RX2Q9UBL9 471 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 PADI2Q9Y2J8 665 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 TMEM184BQ9Y519 407 aaPredicted RBP8.86□□□□□ -0.99
SF3B1-211ENST00000487698 AP4B1Q9Y6B7 739 aa8.86□□□□□ -0.99
SF3B1-211ENST00000487698 A0A087WV62 115 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 CPED1A4D0V7 1026 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 TMEM150CB9EJG8 249 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 H0YIG0 161 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 M0QX08 132 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 EI24O14681 340 aa8.85□□□□□ -0.99
SF3B1-211ENST00000487698 DPM1O60762 260 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms