RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 SUN3Q8TAQ9 357 aa11.89□□□□□ -0.51
PRDM2-208ENST00000487453 BRIX1Q8TDN6 353 aaKnown RBP11.89□□□□□ -0.51
PRDM2-208ENST00000487453 STON2Q8WXE9 905 aa11.89□□□□□ -0.51
PRDM2-208ENST00000487453 ZBED6CLQ96FA7 236 aaPredicted RBP11.89□□□□□ -0.51
PRDM2-208ENST00000487453 TEX37Q96LM6 180 aa11.89□□□□□ -0.51
PRDM2-208ENST00000487453 AMDHD1Q96NU7 426 aa11.89□□□□□ -0.51
PRDM2-208ENST00000487453 DUSP26Q9BV47 211 aa11.89□□□□□ -0.51
PRDM2-208ENST00000487453 RABEP2Q9H5N1 569 aa11.89□□□□□ -0.51
PRDM2-208ENST00000487453 CXorf21Q9HAI6 301 aa11.89□□□□□ -0.51
PRDM2-208ENST00000487453 MMP25Q9NPA2 562 aa11.89□□□□□ -0.51
PRDM2-208ENST00000487453 SLAMF7Q9NQ25 335 aa11.89□□□□□ -0.51
PRDM2-208ENST00000487453 TAS2R7Q9NYW3 318 aa11.89□□□□□ -0.51
PRDM2-208ENST00000487453 MAT2BQ9NZL9 334 aa11.89□□□□□ -0.51
PRDM2-208ENST00000487453 PTGFRNQ9P2B2 879 aa11.89□□□□□ -0.51
PRDM2-208ENST00000487453 A0A1W2PRB8 838 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 A8MUI8 341 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 ANKRD28O15084 1053 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 SLC22A3O75751 556 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 FAM87AP0C7U9 286 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 PCSK2P16519 638 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 SSTR4P31391 388 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 MC3RP41968 323 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 KIR3DL1P43629 444 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 MANFP55145 182 aaKnown RBP11.88□□□□□ -0.51
PRDM2-208ENST00000487453 MYBPC3Q14896 1274 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 EXOSC7Q15024 291 aaKnown RBP11.88□□□□□ -0.51
PRDM2-208ENST00000487453 CEBPEQ15744 281 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 DPY19L1Q2PZI1 675 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 FAM174BQ3ZCQ3 159 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 SPANXN4Q5MJ08 99 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 FCRLBQ6BAA4 426 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 OR4F3Q6IEY1 312 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 JMJD6Q6NYC1 403 aaPredicted RBP11.88□□□□□ -0.51
PRDM2-208ENST00000487453 FAM111BQ6SJ93 734 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 TMEM107Q6UX40 140 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 HSDL2Q6YN16 418 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 RNF111Q6ZNA4 994 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 ZNF551Q7Z340 670 aaPredicted RBP11.88□□□□□ -0.51
PRDM2-208ENST00000487453 SPATA21Q7Z572 469 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 SLC5A8Q8N695 610 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 OR9I1Q8NGQ6 314 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 OR1N1Q8NGS0 311 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 ELP5Q8TE02 316 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 ZNF721Q8TF20 911 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 THAP3Q8WTV1 239 aaPredicted RBP11.88□□□□□ -0.51
PRDM2-208ENST00000487453 KAT2AQ92830 837 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 TESCQ96BS2 214 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 SENP5Q96HI0 755 aaPredicted RBP11.88□□□□□ -0.51
PRDM2-208ENST00000487453 MAGED4Q96JG8 741 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 GAL3ST4Q96RP7 486 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 ELAC2Q9BQ52 826 aaKnown RBP11.88□□□□□ -0.51
PRDM2-208ENST00000487453 SLC25A23Q9BV35 468 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 NUDT9Q9BW91 350 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 DEFB126Q9BYW3 111 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 BHLHE41Q9C0J9 482 aaPredicted RBP11.88□□□□□ -0.51
PRDM2-208ENST00000487453 GLIPR2Q9H4G4 154 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 CLMPQ9H6B4 373 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 SDR39U1Q9NRG7 319 aaPredicted RBP11.88□□□□□ -0.51
PRDM2-208ENST00000487453 DDX18Q9NVP1 670 aaKnown RBP11.88□□□□□ -0.51
PRDM2-208ENST00000487453 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.88□□□□□ -0.51
PRDM2-208ENST00000487453 BCAP29Q9UHQ4 241 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 ZNF223Q9UK11 482 aaPredicted RBP11.88□□□□□ -0.51
PRDM2-208ENST00000487453 COPG1Q9Y678 874 aaKnown RBP11.88□□□□□ -0.51
PRDM2-208ENST00000487453 ACACAQ13085 2346 aa11.88□□□□□ -0.51
PRDM2-208ENST00000487453 URB1O60287 2271 aaKnown RBP11.87□□□□□ -0.51
PRDM2-208ENST00000487453 CFLARO15519 480 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 PRAMEF2O60811 474 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 ALPPP05187 535 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 ABCB1P08183 1280 aaPredicted RBP11.87□□□□□ -0.51
PRDM2-208ENST00000487453 S100A3P33764 101 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 SOAT1P35610 550 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 SRSF11Q05519 484 aaKnown RBP11.87□□□□□ -0.51
PRDM2-208ENST00000487453 KCNAB2Q13303 367 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 SQLEQ14534 574 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 TRMT12Q53H54 448 aaKnown RBP11.87□□□□□ -0.51
PRDM2-208ENST00000487453 ZNF628Q5EBL2 1059 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 AGAP7PQ5VUJ5 663 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 B3GNTL1Q67FW5 361 aaPredicted RBP11.87□□□□□ -0.51
PRDM2-208ENST00000487453 PAOXQ6QHF9 649 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 SLC29A4Q7RTT9 530 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 CAMKMTQ7Z624 323 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 NATD1Q8N6N6 113 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 GLB1L3Q8NCI6 653 aaPredicted RBP11.87□□□□□ -0.51
PRDM2-208ENST00000487453 ZNF675Q8TD23 568 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 C10orf82Q8WW14 230 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 COQ8BQ96D53 544 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 AGAP4Q96P64 663 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 ANKRA2Q9H9E1 313 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 ACSS1Q9NUB1 689 aaPredicted RBP11.87□□□□□ -0.51
PRDM2-208ENST00000487453 ZIM2Q9NZV7 527 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 TEKT2Q9UIF3 430 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 PPIEQ9UNP9 301 aaKnown RBP11.87□□□□□ -0.51
PRDM2-208ENST00000487453 LHX6Q9UPM6 363 aa11.87□□□□□ -0.51
PRDM2-208ENST00000487453 ANKRD11Q6UB99 2663 aaPredicted RBP11.86□□□□□ -0.51
PRDM2-208ENST00000487453 NR5A2O00482 541 aa11.86□□□□□ -0.51
PRDM2-208ENST00000487453 CEACAM4O75871 244 aa11.86□□□□□ -0.51
PRDM2-208ENST00000487453 ZFAND5O76080 213 aa11.86□□□□□ -0.51
PRDM2-208ENST00000487453 SLITRK5O94991 958 aa11.86□□□□□ -0.51
PRDM2-208ENST00000487453 C6orf47O95873 294 aa11.86□□□□□ -0.51
PRDM2-208ENST00000487453 IGKV3-11P04433 115 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms