RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 FUT7Q11130 342 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 MYBPC3Q14896 1274 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 ZNF628Q5EBL2 1059 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 C6orf163Q5TEZ5 329 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 PSMF1Q92530 271 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 TTC9Q92623 222 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 NCLNQ969V3 563 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 ERP27Q96DN0 273 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 ZBED6CLQ96FA7 236 aaPredicted RBP18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 THOC3Q96J01 351 aaKnown RBP18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 TEX37Q96LM6 180 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 AMDHD1Q96NU7 426 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 DUSP26Q9BV47 211 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 SLAMF7Q9NQ25 335 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 TMEM45AQ9NWC5 275 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 TRIM33Q9UPN9 1127 aa18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 PCDHGA9Q9Y5G4 932 aaKnown RBP18.05■□□□□ 0.48
PCOLCE-208ENST00000487172 PLOD2O00469 737 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 DNAJB5O75953 348 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 CELA2AP08217 269 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 ITGAMP11215 1152 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 S1PR1P21453 382 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 ITGA3P26006 1051 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 SOX18P35713 384 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 PGDP52209 483 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 NCBP2P52298 156 aaKnown RBP eCLIP18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 ZNF267Q14586 743 aaPredicted RBP18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 LINC00303Q3SY05 128 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 IRAK1BP1Q5VVH5 260 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 MIER2Q8N344 545 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 AMER2Q8N7J2 671 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 OR7G1Q8NGA0 311 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 OR8K3Q8NH51 312 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 ZFP28Q8NHY6 868 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 NUDT8Q8WV74 236 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 CIDECQ96AQ7 238 aaPredicted RBP18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 MARK4Q96L34 752 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 NUDT9Q9BW91 350 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 OR8D2Q9GZM6 311 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 NSRP1Q9H0G5 558 aaKnown RBP18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 COPS7AQ9UBW8 275 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 ZNF223Q9UK11 482 aaPredicted RBP18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 G3BP2Q9UN86 482 aaKnown RBP18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 ERVK-19Q9WJR5 959 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 DOCK10Q96BY6 2186 aa18.04■□□□□ 0.48
PCOLCE-208ENST00000487172 HRKO00198 91 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 SLC22A3O75751 556 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 BCAS2O75934 225 aaPredicted RBP18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 DRD4P21917 467 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 GPX3P22352 226 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 IL12AP29459 219 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 KIR3DL1P43629 444 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 MANFP55145 182 aaKnown RBP18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 POLE2P56282 527 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 STX1BP61266 288 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 FAM111BQ6SJ93 734 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 ARMC10Q8N2F6 343 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 VWA5B2Q8N398 1253 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 FDCSPQ8NFU4 85 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 OR9A2Q8NGT5 310 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 C10orf82Q8WW14 230 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 ZBTB18Q99592 522 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 CNPPD1Q9BV87 410 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 ZNF552Q9H707 407 aaPredicted RBP18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 TUBD1Q9UJT1 453 aa18.03■□□□□ 0.48
PCOLCE-208ENST00000487172 A0A087WV62 115 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 A0A1W2PRB8 838 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 OR6C76A6NM76 312 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 PLOD3O60568 738 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 SCN2BO60939 215 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 ZFAND5O76080 213 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 CLPSP04118 112 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 NME5P56597 212 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 WNT3P56703 355 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 SLC37A1P57057 533 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 SQLEQ14534 574 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 LTB4RQ15722 352 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 PGS1Q32NB8 556 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 CRB2Q5IJ48 1285 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 ANXA8L1Q5VT79 327 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 CPLX4Q7Z7G2 160 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 LGI4Q8N135 537 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 KIF2BQ8N4N8 673 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 ZNF321PQ8N8H1 164 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 ZNF615Q8N8J6 731 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 ADCY4Q8NFM4 1077 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 BRIX1Q8TDN6 353 aaKnown RBP18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 OR5P2Q8WZ92 322 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 DEFB126Q9BYW3 111 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 ADNPQ9H2P0 1102 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 RABEP2Q9H5N1 569 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 ZNF385DQ9H6B1 395 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 MRGBPQ9NV56 204 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 GPR83Q9NYM4 423 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 ADAM21Q9UKJ8 722 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 PCDHGB7Q9Y5F8 929 aa18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 COPG1Q9Y678 874 aaKnown RBP18.02■□□□□ 0.48
PCOLCE-208ENST00000487172 TRBV11-1A0A0K0K1C0 115 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 A6NL46 340 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms