RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CLK1P49759 484 aaKnown RBP4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 CCR4P51679 360 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 HNRNPFP52597 415 aaKnown RBP4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 HERV-K104P63124 156 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 IL1RL1Q01638 556 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 PPP1R8Q12972 351 aaKnown RBP4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 HEPACAMQ14CZ8 416 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 EPC2Q52LR7 807 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 CAPN13Q6MZZ7 669 aaPredicted RBP4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 MIER3Q7Z3K6 550 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 BATF2Q8N1L9 274 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 ZNF248Q8NDW4 579 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 KIAA1524Q8TCG1 905 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 HCAR2Q8TDS4 363 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 SLCO2A1Q92959 643 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 GLYATL1Q969I3 302 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 MRPL53Q96EL3 112 aaKnown RBP4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 ART5Q96L15 291 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 RUNDC3BQ96NL0 473 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 USP28Q96RU2 1077 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 AGPAT1Q99943 283 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 PKP2Q99959 881 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 OVOL2Q9BRP0 275 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 BARHL1Q9BZE3 327 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 DDX47Q9H0S4 455 aaKnown RBP4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 S100A14Q9HCY8 104 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 B3GAT2Q9NPZ5 323 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 BAIAP2L1Q9UHR4 511 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 TEKT2Q9UIF3 430 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 CNTNAP1P78357 1384 aa4.22□□□□□ -1.73
PRPF38A-203ENST00000487160 SHISA7A6NL88 538 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 RNF103O00237 685 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 LINC01565O15544 149 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 EDIL3O43854 480 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 LYNP07948 512 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 PCP11498 1178 aaKnown RBP4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 PDHA2P29803 388 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 BPIFB3P59826 476 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 CYCSP99999 105 aaKnown RBP4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 MFGE8Q08431 387 aaPredicted RBP4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 ITPK1Q13572 414 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 BSPRYQ5W0U4 402 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 DLEU7Q6UYE1 221 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 ADAD2Q8NCV1 583 aaKnown RBP4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 NUP37Q8NFH4 326 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 OR9Q2Q8NGE9 314 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 OR5M9Q8NGP3 310 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 OR4L1Q8NH43 312 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 S1PR3Q99500 378 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 ZNF577Q9BSK1 485 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 MED20Q9H944 212 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 MED17Q9NVC6 651 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 NINJ2Q9NZG7 142 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 KLK11Q9UBX7 282 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 DNPEPQ9ULA0 475 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 EXOGQ9Y2C4 368 aaKnown RBP4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 A0A1W2PP64 1363 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 SMG6Q86US8 1419 aaKnown RBP4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 MAP3K19Q56UN5 1328 aa4.21□□□□□ -1.74
PRPF38A-203ENST00000487160 PDE4DIPQ5VU43 2346 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 RTL1A6NKG5 1358 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 KDRP35968 1356 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 RNF103-CHMP3A0A140T963 221 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 SH3PXD2BA1X283 911 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 A8MU76 341 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 G3V2L1 256 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 ZG16O60844 167 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 SFTPBP07988 381 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 ZSCAN5DPP0CG00 497 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 CT45A8P0DMV1 189 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 CT45A9P0DMV2 189 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 GPX3P22352 226 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 GLRA1P23415 457 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 RGS19P49795 217 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 WSCD2Q2TBF2 565 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 CT45A2Q5DJT8 189 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 MFSD7Q6UXD7 560 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 KIF6Q6ZMV9 814 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 FRRS1Q6ZNA5 592 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 WDR49Q8IV35 697 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 C8orf46Q8TAG6 207 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 C11orf45Q8TAV5 145 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 PCED1BQ96HM7 432 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 GPR137Q96N19 417 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 ASCL2Q99929 193 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 GANQ9H2C0 597 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 UBE2TQ9NPD8 197 aaPredicted RBP4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 ACOXLQ9NUZ1 547 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 NLGN3Q9NZ94 848 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 KCNN3Q9UGI6 736 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 FAM153AQ9UHL3 310 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 CCPG1Q9ULG6 757 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 WIPI2Q9Y4P8 454 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 ZHX2Q9Y6X8 837 aa4.2□□□□□ -1.74
PRPF38A-203ENST00000487160 SCN11AQ9UI33 1791 aa4.19□□□□□ -1.74
PRPF38A-203ENST00000487160 SLX4Q8IY92 1834 aa4.19□□□□□ -1.74
PRPF38A-203ENST00000487160 C19orf81C9J6K1 198 aa4.19□□□□□ -1.74
PRPF38A-203ENST00000487160 K7EQD1 137 aa4.19□□□□□ -1.74
PRPF38A-203ENST00000487160 CCSO14618 274 aa4.19□□□□□ -1.74
PRPF38A-203ENST00000487160 MTRF1O75570 445 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms