RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 SH2D1BO14796 132 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 DUSP11O75319 330 aaKnown RBP2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 STAM2O75886 525 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 OR6B1O95007 311 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 IGHG1P01857 330 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 PROS1P07225 676 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 GNSP15586 552 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 CCNA2P20248 432 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 RIDAP52758 137 aaKnown RBP2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 NDST1P52848 882 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 BPIFB3P59826 476 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 RPS4XP62701 263 aaKnown RBP2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 HAGHQ16775 308 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 POM121L1PQ3SYA9 428 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 FAM182AQ5T1J6 154 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 RHBDD2Q6NTF9 364 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 STEAP1BQ6NZ63 245 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 CWC27Q6UX04 472 aaKnown RBP2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 METTL7BQ6UX53 244 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 RBM43Q6ZSC3 357 aaKnown RBP2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 GPR142Q7Z601 462 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 ADGRD2Q7Z7M1 963 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 YRDCQ86U90 279 aaKnown RBP2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 CATSPER3Q86XQ3 398 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 PHC2Q8IXK0 858 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 LMNTD2Q8IXW0 634 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 ZNF440Q8IYI8 595 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 LINC00518Q8N0U6 118 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 LRRC17Q8N6Y2 441 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 ZNF781Q8N8C0 355 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 RELL2Q8NC24 303 aaPredicted RBP2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 CNNM3Q8NE01 707 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 CHDHQ8NE62 594 aaPredicted RBP2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 OR1B1Q8NGR6 318 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 FBXO25Q8TCJ0 367 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 TMEM45BQ96B21 275 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 C16orf58Q96GQ5 468 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 CAPNS2Q96L46 248 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 SAMD8Q96LT4 415 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 RBM4BQ9BQ04 359 aaKnown RBP2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 CBWD1Q9BRT8 395 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 CHCHD5Q9BSY4 110 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 CABLES2Q9BTV7 478 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 TRIM15Q9C019 465 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 KRT23Q9C075 422 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 NACA2Q9H009 215 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 TUBB1Q9H4B7 451 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 NT5DC2Q9H857 520 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 CTSZQ9UBR2 303 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 NUDCQ9Y266 331 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 PLEKHA6Q9Y2H5 1048 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 SLC6A5Q9Y345 797 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 ATG4BQ9Y4P1 393 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 AUP1Q9Y679 476 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 UBE4BO95155 1302 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 RASGRF2O14827 1237 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 FRAT2O75474 233 aaPredicted RBP2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 SORBS2O94875 1100 aaKnown RBP2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 PDGFBP01127 241 aaPredicted RBP2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 TGFAP01135 160 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 ARF4P18085 180 aaPredicted RBP2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 TMOD1P28289 359 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 AKT2P31751 481 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 ASMTP46597 345 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 SLC6A8P48029 635 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 NPY2RP49146 381 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 ATP4BP51164 291 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 ZNF131P52739 623 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 DSCR10P59022 87 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 NME3Q13232 169 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 ITPK1Q13572 414 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 SMC1AQ14683 1233 aaKnown RBP2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 SIX1Q15475 284 aaPredicted RBP2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 CLPPQ16740 277 aaPredicted RBP2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 SHROOM1Q2M3G4 852 aaPredicted RBP2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 GLIPR1L2Q4G1C9 344 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 AGKQ53H12 422 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 IL23RQ5VWK5 629 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 FAM159AQ6UWV7 190 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 NUFIP2Q7Z417 695 aaKnown RBP2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 RPAINQ86UA6 219 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 SAMD12Q8N8I0 201 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 ZNRF1Q8ND25 227 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 OR4F5Q8NH21 305 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 DQX1Q8TE96 717 aaKnown RBP2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 TMEM37Q8WXS4 190 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 PHYHIPQ92561 330 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 C14orf79Q96F83 325 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 ZNF597Q96LX8 424 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 ACCSQ96QU6 501 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 KCNK16Q96T55 309 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 VGLL1Q99990 258 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 LIME1Q9H400 295 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 DCTPP1Q9H773 170 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 JPT2Q9H910 190 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 PANK3Q9H999 370 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 Q9HAA7 133 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 GTSE1Q9NYZ3 720 aa2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 EIF3KQ9UBQ5 218 aaKnown RBP2.87□□□□□ -1.95
SNRNP27-204ENST00000487029 LHX3Q9UBR4 397 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms