RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 A0A1W2PQU0 124 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 PRR23AA6NEV1 266 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 PDZK1P1A8MUH7 402 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 C4orf51C9J302 202 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 TLR4O00206 839 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 HAT1O14929 419 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 PRKRAO75569 313 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 PIPP12273 146 aaPredicted RBP16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 IGFALSP35858 605 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 SLC15A1P46059 708 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 RGS6P49758 472 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 UGT2B15P54855 530 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 SNRPGP62308 76 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 SLAMF1Q13291 335 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 UAP1L1Q3KQV9 507 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 ZNF404Q494X3 552 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 SLX4IPQ5VYV7 408 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 MRM1Q6IN84 353 aaKnown RBP16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 KRT73Q86Y46 540 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 BBS4Q96RK4 519 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 SLC17A9Q9BYT1 436 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 LMAN2LQ9H0V9 348 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 MMP27Q9H306 513 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 ZNF576Q9H609 170 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 C11orf16Q9NQ32 467 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 MOSPD1Q9UJG1 213 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 GPSM3Q9Y4H4 160 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 ASB4Q9Y574 426 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 PCDHGA3Q9Y5H0 932 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 DOCK9Q9BZ29 2069 aa16.99■□□□□ 0.31
PDLIM7-207ENST00000486828 METTL15A6NJ78 407 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 WASHC1A8K0Z3 465 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 ERI3O43414 337 aaKnown RBP16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 STATHP02808 62 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 HIST1H1TP22492 207 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 GDI1P31150 447 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 GRK5P34947 590 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 AHRP35869 848 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 DGKEP52429 567 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 ARFIP1P53367 373 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 IFITM3Q01628 133 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 ITPRIPL2Q3MIP1 535 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 PGBD2Q6P3X8 592 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 ABHD17CQ6PCB6 329 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 WASH2PQ6VEQ5 465 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 OR2L3Q8NG85 312 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 OR8K5Q8NH50 307 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 BBS10Q8TAM1 723 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 SFXN5Q8TD22 340 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 GANCQ8TET4 914 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 SLC25A19Q9HC21 320 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 BCL2L10Q9HD36 194 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 FZD3Q9NPG1 666 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 PRDM7Q9NQW5 492 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 FBXL12Q9NXK8 326 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 TAS2R16Q9NYV7 291 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 LMCD1Q9NZU5 365 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 A4GNTQ9UNA3 340 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 IFT52Q9Y366 437 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 REV3LO60673 3130 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 GLOD5A6NK44 160 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 ZW10O43264 779 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 PLRG1O43660 514 aaKnown RBP16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 GUCY1B2O75343 617 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 UGT2B17O75795 530 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 SLITRK5O94991 958 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 ADRA2AP08913 450 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 HOXB3P14651 431 aaPredicted RBP16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 ATP5A1P25705 553 aaKnown RBP16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 TIE1P35590 1138 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 LIMK1P53667 647 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 CRISP3P54108 245 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 RPE65Q16518 533 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 TOR1AIP1Q5JTV8 583 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 PERM1Q5SV97 790 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 C12orf73Q69YU5 71 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 PLAG1Q6DJT9 500 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 COMTD1Q86VU5 262 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 ACOT4Q8N9L9 421 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 MINDY2Q8NBR6 621 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 KBTBD8Q8NFY9 601 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 OR14C36Q8NHC7 312 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 MACROD1Q9BQ69 325 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 APOOQ9BUR5 198 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 SARGQ9BW04 601 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 IGFLR1Q9H665 355 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 ARMC7Q9H6L4 198 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 KLK4Q9Y5K2 254 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 A3GALT2U3KPV4 340 aa16.98■□□□□ 0.31
PDLIM7-207ENST00000486828 A0A1W2PR48 441 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 RNGTTO60942 597 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 ERAL1O75616 437 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 SOX14O95416 240 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 PEBP1P30086 187 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 KIR2DL1P43626 348 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 ANXA11P50995 505 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 XKP51811 444 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 SEC13P55735 322 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 GPR19Q15760 415 aa16.97■□□□□ 0.31
PDLIM7-207ENST00000486828 TMEM201Q5SNT2 666 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms