RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 SOX3P41225 446 aa16.61■□□□□ 0.25
TNXB-205ENST00000486148 SNRPGP62308 76 aaKnown RBP16.61■□□□□ 0.25
TNXB-205ENST00000486148 CNTN1Q12860 1018 aa16.61■□□□□ 0.25
TNXB-205ENST00000486148 ILKQ13418 452 aa16.61■□□□□ 0.25
TNXB-205ENST00000486148 HNRNPA1L2Q32P51 320 aaKnown RBP16.61■□□□□ 0.25
TNXB-205ENST00000486148 COMTD1Q86VU5 262 aa16.61■□□□□ 0.25
TNXB-205ENST00000486148 CELF5Q8N6W0 485 aaKnown RBP16.61■□□□□ 0.25
TNXB-205ENST00000486148 AMER3Q8N944 861 aa16.61■□□□□ 0.25
TNXB-205ENST00000486148 TMIEQ8NEW7 156 aa16.61■□□□□ 0.25
TNXB-205ENST00000486148 ST13P5Q8NFI4 369 aaPredicted RBP16.61■□□□□ 0.25
TNXB-205ENST00000486148 RASSF5Q8WWW0 418 aa16.61■□□□□ 0.25
TNXB-205ENST00000486148 OR8D1Q8WZ84 308 aa16.61■□□□□ 0.25
TNXB-205ENST00000486148 TEX10Q9NXF1 929 aaPredicted RBP16.61■□□□□ 0.25
TNXB-205ENST00000486148 CHD7Q9P2D1 2997 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 ANTXRLA6NF34 631 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 H3BN98 237 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 H7BY64 318 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 VEGFDO43915 354 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 H1F0P07305 194 aaKnown RBP16.6■□□□□ 0.25
TNXB-205ENST00000486148 SOX6P35712 828 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 KCNJ5P48544 419 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 HEPACAMQ14CZ8 416 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 SYPL1Q16563 259 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 LRRC26Q2I0M4 334 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 FAM214AQ32MH5 1076 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 CDONQ4KMG0 1287 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 OLIG3Q7RTU3 272 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 CCDC190Q86UF4 302 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 GRAMD2AQ8IUY3 354 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 TP53I13Q8NBR0 393 aaPredicted RBP16.6■□□□□ 0.25
TNXB-205ENST00000486148 SMPDL3AQ92484 453 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 SLC6A18Q96N87 628 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 PRAP1Q96NZ9 151 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 SDHCQ99643 169 aaPredicted RBP16.6■□□□□ 0.25
TNXB-205ENST00000486148 NUAK2Q9H093 628 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 ZDHHC4Q9NPG8 344 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 SATB2Q9UPW6 733 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 MGAT4BQ9UQ53 548 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 CFL2Q9Y281 166 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 SLC27A6Q9Y2P4 619 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 OTOL1A6NHN0 477 aaPredicted RBP16.6■□□□□ 0.25
TNXB-205ENST00000486148 ERGP11308 486 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 VIPR2P41587 438 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 HTRA4P83105 476 aaPredicted RBP16.6■□□□□ 0.25
TNXB-205ENST00000486148 TIMM50Q3ZCQ8 353 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 C12orf73Q69YU5 71 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 PGBD2Q6P3X8 592 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 AMZ2Q86W34 360 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 PPP1R16AQ96I34 528 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 RNF170Q96K19 258 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 ZNF354BQ96LW1 612 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 TRNT1Q96Q11 434 aaKnown RBP16.6■□□□□ 0.25
TNXB-205ENST00000486148 AIF1LQ9BQI0 150 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 CNPPD1Q9BV87 410 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 MVB12BQ9H7P6 319 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 NEUROD4Q9HD90 331 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 SEMA3GQ9NS98 782 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 NDOR1Q9UHB4 597 aa16.6■□□□□ 0.25
TNXB-205ENST00000486148 A0A0G2JN53 185 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 FAAHO00519 579 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 TBX19O60806 448 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 CSO75390 466 aaKnown RBP16.59■□□□□ 0.25
TNXB-205ENST00000486148 ETV6P41212 452 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 FRKP42685 505 aaPredicted RBP16.59■□□□□ 0.25
TNXB-205ENST00000486148 XKP51811 444 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 SLC34A3Q8N130 599 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 SDR16C5Q8N3Y7 309 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 SLC7A13Q8TCU3 470 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 POF1BQ8WVV4 589 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 MAP6Q96JE9 813 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 PELI2Q9HAT8 420 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 EXOSC4Q9NPD3 245 aaKnown RBP16.59■□□□□ 0.25
TNXB-205ENST00000486148 C5orf42Q9H799 3197 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 WASHC1A8K0Z3 465 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 PPM1DO15297 605 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 SCG5P05408 212 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 RB1P06400 928 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 CSTF2P33240 577 aaKnown RBP eCLIP16.59■□□□□ 0.25
TNXB-205ENST00000486148 CCT3P49368 545 aaKnown RBP16.59■□□□□ 0.25
TNXB-205ENST00000486148 PIN1Q13526 163 aaPredicted RBP16.59■□□□□ 0.25
TNXB-205ENST00000486148 SPANXN2Q5MJ10 180 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 WASH2PQ6VEQ5 465 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 ERN2Q76MJ5 926 aaKnown RBP16.59■□□□□ 0.25
TNXB-205ENST00000486148 ZNF438Q7Z4V0 828 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 UBE3DQ7Z6J8 389 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 ETFBKMTQ8IXQ9 262 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 IQCF1Q8N6M8 205 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 OR5D16Q8NGK9 328 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 CITED4Q96RK1 184 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 TREX2Q9BQ50 279 aaPredicted RBP16.59■□□□□ 0.25
TNXB-205ENST00000486148 FUZQ9BT04 418 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 MENTQ9BUN1 341 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 LGR4Q9BXB1 951 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 WASH6PQ9NQA3 447 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 EHD3Q9NZN3 535 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 SEC14L3Q9UDX4 400 aa16.59■□□□□ 0.25
TNXB-205ENST00000486148 EDDM13A0A1B0GTR0 161 aa16.58■□□□□ 0.25
TNXB-205ENST00000486148 SLC28A2O43868 658 aa16.58■□□□□ 0.25
TNXB-205ENST00000486148 TP53P04637 393 aaPredicted RBP16.58■□□□□ 0.25
TNXB-205ENST00000486148 OR12D1P0DN82 309 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms