RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 COMMD6Q7Z4G1 85 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 OR4N5Q8IXE1 308 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 C9orf40Q8IXQ3 194 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 SAMD14Q8IZD0 417 aaPredicted RBP6.48□□□□□ -1.37
VPS50-218ENST00000485994 EID3Q8N140 333 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 RIBC1Q8N443 379 aaPredicted RBP6.48□□□□□ -1.37
VPS50-218ENST00000485994 MEIOBQ8N635 442 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 ZNF321PQ8N8H1 164 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 ZNF441Q8N8Z8 693 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 PSD4Q8NDX1 1056 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 OR7G1Q8NGA0 311 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 FAM76AQ8TAV0 307 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 RDH11Q8TC12 318 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 METTL6Q8TCB7 284 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 PAQR8Q8TEZ7 354 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 SELENOMQ8WWX9 145 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 ASB15Q8WXK1 588 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 RIT1Q92963 219 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 CTHRC1Q96CG8 243 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 NTNG2Q96CW9 530 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 ERP27Q96DN0 273 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 SECISBP2Q96T21 854 aaKnown RBP6.48□□□□□ -1.37
VPS50-218ENST00000485994 FAM173AQ9BQD7 235 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 SORBS1Q9BX66 1292 aaKnown RBP6.48□□□□□ -1.37
VPS50-218ENST00000485994 MRPL1Q9BYD6 325 aaKnown RBP6.48□□□□□ -1.37
VPS50-218ENST00000485994 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 OR8D2Q9GZM6 311 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 ZDHHC11Q9H8X9 412 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 ANKZF1Q9H8Y5 726 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 CXorf21Q9HAI6 301 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 KLHL1Q9NR64 748 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 MKS1Q9NXB0 559 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 QPCTLQ9NXS2 382 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 CNIH4Q9P003 139 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 ZNF639Q9UID6 485 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 MCM8Q9UJA3 840 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 EMCNQ9ULC0 261 aa6.48□□□□□ -1.37
VPS50-218ENST00000485994 KLF2Q9Y5W3 355 aaPredicted RBP6.48□□□□□ -1.37
VPS50-218ENST00000485994 INTS1Q8N201 2190 aaKnown RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 ARHGAP10A1A4S6 786 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 CYSRT1A8MQ03 144 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 NPIPA5E9PKD4 350 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 E9PLN8 166 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 WWP2O00308 870 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 MANBAO00462 879 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 CCL21O00585 134 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 SUSD5O60279 629 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 PLIN3O60664 434 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 ZNF354AO60765 605 aaPredicted RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 GLSO94925 669 aaPredicted RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 OR6B1O95007 311 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 NADKO95544 446 aaPredicted RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 IGHG3P01860 377 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 PROCP04070 461 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 CLPSP04118 112 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 ATP1B1P05026 303 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 NUDT17P0C025 328 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 FBXO45P0C2W1 286 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 CPMP14384 443 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 ZNF24P17028 368 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 SERPINB3P29508 390 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 SOX18P35713 384 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 SOX3P41225 446 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 MEOX1P50221 254 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 MAPK12P53778 367 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 PMP22Q01453 160 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 SRSF11Q05519 484 aaKnown RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 MGAT2Q10469 447 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 FOXO1Q12778 655 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 LCP2Q13094 533 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 ZNF267Q14586 743 aaPredicted RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 NTRK2Q16620 822 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 PRICKLE4Q2TBC4 344 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 SPIN4Q56A73 249 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 CMPK2Q5EBM0 449 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 SLC22A10Q63ZE4 541 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 TMEM81Q6P7N7 255 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 LYPD8Q6UX82 237 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 ZYG11AQ6WRX3 759 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 DGAT2L6Q6ZPD8 337 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 GPRIN3Q6ZVF9 776 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 RPS27LQ71UM5 84 aaKnown RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 SLC29A4Q7RTT9 530 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 DOLPP1Q86YN1 238 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 ZNF808Q8N4W9 903 aaPredicted RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 CPSF7Q8N684 471 aaKnown RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 ZNF615Q8N8J6 731 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.47□□□□□ -1.37
VPS50-218ENST00000485994 SLC22A8Q8TCC7 542 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 PHF10Q8WUB8 498 aaKnown RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 UCN3Q969E3 161 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 ADIPOR1Q96A54 375 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 PPWD1Q96BP3 646 aaKnown RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 ZNF681Q96N22 645 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 TMEM237Q96Q45 408 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 VKORC1Q9BQB6 163 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 TMEM109Q9BVC6 243 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 FAIM2Q9BWQ8 316 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 GSTO2Q9H4Y5 243 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 IL1RL2Q9HB29 575 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms