RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 MRGPRX3Q96LB0 322 aa11.88□□□□□ -0.51
LINC00477-201ENST00000483544 HS6ST2Q96MM7 605 aa11.88□□□□□ -0.51
LINC00477-201ENST00000483544 PKP4Q99569 1192 aa11.88□□□□□ -0.51
LINC00477-201ENST00000483544 NXF2Q9GZY0 626 aaKnown RBP11.88□□□□□ -0.51
LINC00477-201ENST00000483544 TMEM38AQ9H6F2 299 aa11.88□□□□□ -0.51
LINC00477-201ENST00000483544 COQ3Q9NZJ6 369 aa11.88□□□□□ -0.51
LINC00477-201ENST00000483544 GPN3Q9UHW5 284 aaPredicted RBP11.88□□□□□ -0.51
LINC00477-201ENST00000483544 TRAPPC4Q9Y296 219 aa11.88□□□□□ -0.51
LINC00477-201ENST00000483544 U3KQV3 271 aa11.88□□□□□ -0.51
LINC00477-201ENST00000483544 NUP214P35658 2090 aaPredicted RBP11.87□□□□□ -0.51
LINC00477-201ENST00000483544 KIF26AQ9ULI4 1882 aaPredicted RBP11.87□□□□□ -0.51
LINC00477-201ENST00000483544 C2orf74A8MZ97 194 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 PTGES3LE9PB15 166 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 NPC1O15118 1278 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 TSPAN6O43657 245 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 ELFN1P0C7U0 828 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 SMIM6P0DI80 62 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 RRASP10301 218 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 IFI30P13284 250 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 CCL5P13501 91 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 POU3F4P49335 361 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 SELENOWP63302 87 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 VLDLRP98155 873 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 SEMG2Q02383 582 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 ELP6Q0PNE2 266 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 NPRL3Q12980 569 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 SLC14A1Q13336 389 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 PDE7AQ13946 482 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 ZNF658BQ4V348 819 aaPredicted RBP11.87□□□□□ -0.51
LINC00477-201ENST00000483544 HSD17B12Q53GQ0 312 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 UBE2J2Q8N2K1 259 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 OXR1Q8N573 874 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 C1orf52Q8N6N3 182 aaKnown RBP11.87□□□□□ -0.51
LINC00477-201ENST00000483544 ATG16L2Q8NAA4 619 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 OR52N2Q8NGI0 321 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 MED8Q96G25 268 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 LINC00615Q96LM1 132 aaPredicted RBP11.87□□□□□ -0.51
LINC00477-201ENST00000483544 ZSWIM3Q96MP5 696 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 ZNF251Q9BRH9 671 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 SGPP1Q9BX95 441 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 CCDC90BQ9GZT6 254 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 CRISPLD2Q9H0B8 497 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 RNF208Q9H0X6 261 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 SAV1Q9H4B6 383 aaPredicted RBP11.87□□□□□ -0.51
LINC00477-201ENST00000483544 MYNNQ9NPC7 610 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 THSD1Q9NS62 852 aa11.87□□□□□ -0.51
LINC00477-201ENST00000483544 THUMPD1Q9NXG2 353 aaKnown RBP11.87□□□□□ -0.51
LINC00477-201ENST00000483544 CLDN24A6NM45 220 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 H3BM21 787 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 PSMD9O00233 223 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 CCL16O15467 120 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 PCDH7O60245 1069 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 EIF1BO60739 113 aaKnown RBP11.86□□□□□ -0.51
LINC00477-201ENST00000483544 FAM20BO75063 409 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 C1orf105O95561 183 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 PRNPP04156 253 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 ALPPP05187 535 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 POU2F2P09086 479 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 HNRNPA1P09651 372 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC00477-201ENST00000483544 C1GALT1C1LP0DN25 315 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 EIF1P41567 113 aaKnown RBP11.86□□□□□ -0.51
LINC00477-201ENST00000483544 GSTM5P46439 218 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 MAPK10P53779 464 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 KCNJ10P78508 379 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 SIM2Q14190 667 aaPredicted RBP11.86□□□□□ -0.51
LINC00477-201ENST00000483544 KCNAB1Q14722 419 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 GRK1Q15835 563 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 ZNF630Q2M218 657 aaPredicted RBP11.86□□□□□ -0.51
LINC00477-201ENST00000483544 IFI44LQ53G44 452 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 GCNT6Q5T4J0 391 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 TRIM40Q6P9F5 258 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 TMEM220Q6QAJ8 160 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 COMMD7Q86VX2 200 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 OR4A15Q8NGL6 344 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 HUS1BQ8NHY5 278 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 MCFD2Q8NI22 146 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 CNIH3Q8TBE1 160 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 ST8SIA2Q92186 375 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 NXPE2Q96DL1 559 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 DTD2Q96FN9 168 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 COQ10AQ96MF6 247 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 OR4K3Q96R72 315 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 MTERF1Q99551 399 aaKnown RBP11.86□□□□□ -0.51
LINC00477-201ENST00000483544 DPEP2Q9H4A9 486 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 MBD1Q9UIS9 605 aaPredicted RBP11.86□□□□□ -0.51
LINC00477-201ENST00000483544 POFUT2Q9Y2G5 429 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 DOCK6Q96HP0 2047 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 PTPRSQ13332 1948 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 DENND4AQ7Z401 1863 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 KIAA1549LQ6ZVL6 1849 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 NUP210Q8TEM1 1887 aaPredicted RBP11.86□□□□□ -0.51
LINC00477-201ENST00000483544 MEIOCA2RUB1 952 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 OR2AG2A6NM03 316 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 TOR1BO14657 336 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 KHNYNO15037 678 aaKnown RBP11.86□□□□□ -0.51
LINC00477-201ENST00000483544 GPR37L1O60883 481 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 MITFO75030 526 aaPredicted RBP11.86□□□□□ -0.51
LINC00477-201ENST00000483544 HTR3BO95264 441 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 MED26O95402 600 aa11.86□□□□□ -0.51
LINC00477-201ENST00000483544 SLC16A8O95907 504 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms