RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 ARL14Q8N4G2 192 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 ATG16L2Q8NAA4 619 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 OR5D16Q8NGK9 328 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 OR9A2Q8NGT5 310 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 BBS10Q8TAM1 723 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 GIPC3Q8TF64 312 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 XAGE5Q8WWM1 108 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 CSF3RQ99062 836 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 GABARAPL3Q9BY60 117 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 C3orf14Q9HBI5 128 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 KRT84Q9NSB2 600 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 ACER3Q9NUN7 267 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 KIF17Q9P2E2 1029 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 NDRG4Q9ULP0 352 aaKnown RBP12.46□□□□□ -0.41
CPNE1-225ENST00000483495 SH3GLB1Q9Y371 365 aa12.46□□□□□ -0.41
CPNE1-225ENST00000483495 MRPS2Q9Y399 296 aaKnown RBP12.46□□□□□ -0.41
CPNE1-225ENST00000483495 LILRA5A6NI73 299 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 DNAJB6O75190 326 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 SERPINB7O75635 380 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 UBXN7O94888 489 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 NR2F1P10589 423 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 ALPPL2P10696 532 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 ETS2P15036 469 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 TYRP1P17643 537 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 PAX7P23759 505 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 CRHBPP24387 322 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 MAOBP27338 520 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 MC3RP41968 323 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 MAN2A2P49641 1150 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 CRISP3P54108 245 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 MAZP56270 477 aaKnown RBP12.46□□□□□ -0.42
CPNE1-225ENST00000483495 SPIBQ01892 262 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 RPL6Q02878 288 aaKnown RBP12.46□□□□□ -0.42
CPNE1-225ENST00000483495 ZP2Q05996 745 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 FUT5Q11128 374 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 GNA13Q14344 377 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 LASP1Q14847 261 aaKnown RBP12.46□□□□□ -0.42
CPNE1-225ENST00000483495 MICAQ29983 383 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 CTU2Q2VPK5 515 aaKnown RBP12.46□□□□□ -0.42
CPNE1-225ENST00000483495 CYP27C1Q4G0S4 372 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 KLHL35Q6PF15 583 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 USP53Q70EK8 1073 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 SZRD1Q7Z422 152 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 SLC44A2Q8IWA5 706 aaPredicted RBP12.46□□□□□ -0.42
CPNE1-225ENST00000483495 SDR16C5Q8N3Y7 309 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 ARHGEF39Q8N4T4 335 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 CSNK1A1LQ8N752 337 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 TTC29Q8NA56 475 aaPredicted RBP12.46□□□□□ -0.42
CPNE1-225ENST00000483495 SETD9Q8NE22 299 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 NUP43Q8NFH3 380 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 OR4K14Q8NGD5 310 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 ZNF354BQ96LW1 612 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 TSC22D3Q99576 134 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 PITX2Q99697 317 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 RIBC2Q9H4K1 309 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 TBC1D17Q9HA65 648 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 IL21RQ9HBE5 538 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 TRPC4Q9UBN4 977 aa12.46□□□□□ -0.42
CPNE1-225ENST00000483495 FAM32AQ9Y421 112 aaKnown RBP12.46□□□□□ -0.42
CPNE1-225ENST00000483495 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 ARRDC5A6NEK1 342 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 J3KTA2 159 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 GALR3O60755 368 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-225ENST00000483495 ANXA8P13928 327 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 ST6GAL1P15907 406 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 PTGER1P34995 402 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 XKP51811 444 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 PRKAG1P54619 331 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 CDH12P55289 794 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 TPD52P55327 224 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-225ENST00000483495 NXPH1P58417 271 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 GABARAPL2P60520 117 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 TOP3AQ13472 1001 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-225ENST00000483495 RAPSNQ13702 412 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 ZNF773Q6PK81 442 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 KRT73Q86Y46 540 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 OR10G2Q8NGC3 310 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 PROX1Q92786 737 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 ZNF566Q969W8 418 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 GIMAP5Q96F15 307 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 MAGED4Q96JG8 741 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 COL21A1Q96P44 957 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 BTBD2Q9BX70 525 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 NPLQ9BXD5 320 aaPredicted RBP12.45□□□□□ -0.42
CPNE1-225ENST00000483495 FAM60AQ9NP50 221 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 TMEM74BQ9NUR3 256 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 CEPT1Q9Y6K0 416 aa12.45□□□□□ -0.42
CPNE1-225ENST00000483495 A0A0G2JPF8 293 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 HNRNPCL2B2RXH8 293 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 HNRNPCL3B7ZW38 293 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 CYR61O00622 381 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 EIF2S1P05198 315 aaKnown RBP12.44□□□□□ -0.42
CPNE1-225ENST00000483495 CHRM4P08173 479 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 HNRNPCL4P0DMR1 293 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 YAP1P46937 504 aaKnown RBP12.44□□□□□ -0.42
CPNE1-225ENST00000483495 CAPZBP47756 277 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 NPRL3Q12980 569 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 LTB4RQ15722 352 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 MEP1AQ16819 746 aa12.44□□□□□ -0.42
CPNE1-225ENST00000483495 EXOC3L2Q2M3D2 409 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms