RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 ZNF267Q14586 743 aaPredicted RBP11.43□□□□□ -0.58
SDC1-206ENST00000482879 MLC1Q15049 377 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 PRICKLE4Q2TBC4 344 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 MMEL1Q495T6 779 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 FAM91A1Q658Y4 838 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 PAPD4Q6PIY7 484 aaKnown RBP11.43□□□□□ -0.58
SDC1-206ENST00000482879 SLC2A7Q6PXP3 512 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 FAM111BQ6SJ93 734 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 TRPM8Q7Z2W7 1104 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 GALNT12Q8IXK2 581 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 OR11G2Q8NGC1 345 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 OR4A15Q8NGL6 344 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 ZNF675Q8TD23 568 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 PTPMT1Q8WUK0 201 aaPredicted RBP11.43□□□□□ -0.58
SDC1-206ENST00000482879 KAT2AQ92830 837 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 DAZLQ92904 295 aaKnown RBP11.43□□□□□ -0.58
SDC1-206ENST00000482879 CMTM5Q96DZ9 223 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 CCDC115Q96NT0 180 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 DCBLD2Q96PD2 775 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 CCNL2Q96S94 520 aaPredicted RBP11.43□□□□□ -0.58
SDC1-206ENST00000482879 LPAR4Q99677 370 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 INPP5KQ9BT40 448 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 CNPPD1Q9BV87 410 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 CXorf21Q9HAI6 301 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 MAT2BQ9NZL9 334 aa11.43□□□□□ -0.58
SDC1-206ENST00000482879 LEF1Q9UJU2 399 aaPredicted RBP11.43□□□□□ -0.58
SDC1-206ENST00000482879 IGHV1-45A0A0A0MS14 117 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 SAGE2PA6NJ88 616 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 CCT8L1PA6NM43 557 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 ZNF891A8MT65 544 aaPredicted RBP11.42□□□□□ -0.58
SDC1-206ENST00000482879 FBP2O00757 339 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 RFXANKO14593 260 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 NKX2-8O15522 239 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 RRP8O43159 456 aaKnown RBP11.42□□□□□ -0.58
SDC1-206ENST00000482879 CT62P0C5K7 136 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 COX6A1P12074 109 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 WT1P19544 449 aaPredicted RBP11.42□□□□□ -0.58
SDC1-206ENST00000482879 PRDX6P30041 224 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 TRPC1P48995 793 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 HBA1P69905 142 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 MGAT2Q10469 447 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 STX5Q13190 355 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 KRT72Q14CN4 511 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 PCOLCEQ15113 449 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 TERF2Q15554 542 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 SPRED3Q2MJR0 410 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 ZNF628Q5EBL2 1059 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 PAGE3Q5JUK9 113 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 C6orf10Q5SRN2 563 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 TMEM107Q6UX40 140 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 UNQ6494/PRO21346Q6UXR6 183 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 NDUFAF7Q7L592 441 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 MRGPREQ86SM8 312 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 SPACA3Q8IXA5 215 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 OR14A16Q8NHC5 309 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 ADAMTS17Q8TE56 1095 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 GTF2H4Q92759 462 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 ELP4Q96EB1 424 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 SENP5Q96HI0 755 aaPredicted RBP11.42□□□□□ -0.58
SDC1-206ENST00000482879 MAGED4Q96JG8 741 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 IP6K3Q96PC2 410 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 PANX1Q96RD7 426 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 WDR77Q9BQA1 342 aaPredicted RBP11.42□□□□□ -0.58
SDC1-206ENST00000482879 OR8D2Q9GZM6 311 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 ZNF700Q9H0M5 742 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 SERHLQ9NQF3 203 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 ARL8BQ9NVJ2 186 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 P4HTMQ9NXG6 502 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 TAS2R9Q9NYW1 312 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.42□□□□□ -0.58
SDC1-206ENST00000482879 ERVK-11Q9UQG0 969 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 SNX8Q9Y5X2 465 aa11.42□□□□□ -0.58
SDC1-206ENST00000482879 NSG1A0A0A6YYJ2 146 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 A0A1W2PQ72 361 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 BBIP1A8MTZ0 92 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 HRKO00198 91 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 PLOD2O00469 737 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 EFSO43281 561 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 SLITRK5O94991 958 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 ANP32DO95626 131 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 DDAH2O95865 285 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 GSNP06396 782 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 PRKAR1AP10644 381 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 SOAT1P35610 550 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 SOX18P35713 384 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 MC3RP41968 323 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 CDKN2CP42773 168 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 MRPS35P82673 323 aaKnown RBP11.41□□□□□ -0.58
SDC1-206ENST00000482879 ATP1A4Q13733 1029 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 SPDYE7PQ495Y7 208 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 TRMT12Q53H54 448 aaKnown RBP11.41□□□□□ -0.58
SDC1-206ENST00000482879 ATP1A1-AS1Q5TC04 95 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 REP15Q6BDI9 236 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 LRRC69Q6ZNQ3 347 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 ZNF621Q6ZSS3 439 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 RETREG3Q86VR2 466 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 VWA5B2Q8N398 1253 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 ZSCAN1Q8NBB4 408 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 MORN4Q8NDC4 146 aa11.41□□□□□ -0.58
SDC1-206ENST00000482879 NFAM1Q8NET5 270 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms