RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 COQ7Q99807 217 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 TRIM6Q9C030 488 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-210ENST00000482158 ABCG8Q9H221 673 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 SLC6A5Q9Y345 797 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 AUP1Q9Y679 476 aa4.54□□□□□ -1.68
SF3B1-210ENST00000482158 TEX48A0A1B0GUV7 120 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 SEC22BO75396 215 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 APRTP07741 180 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 HIST1H2AGP0C0S8 130 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-210ENST00000482158 MBL2P11226 248 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-210ENST00000482158 CAPN2P17655 700 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 IL4RP24394 825 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 PTPN4P29074 926 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 SFNP31947 248 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 ZNF131P52739 623 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 NDST1P52848 882 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 COX10Q12887 443 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 CLPPQ16740 277 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-210ENST00000482158 PCK2Q16822 640 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 NEK5Q6P3R8 708 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 WDR88Q6ZMY6 472 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 ZNF841Q6ZN19 808 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-210ENST00000482158 CSNK1G2-AS1Q8NCQ2 148 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 RDH11Q8TC12 318 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 HIST1H2ACQ93077 130 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 C16orf58Q96GQ5 468 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 LRRCC1Q9C099 1032 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 TNMDQ9H2S6 317 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 Q9HAA7 133 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 ERVK-18Q9QC07 812 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 GON4LQ3T8J9 2241 aa4.53□□□□□ -1.68
SF3B1-210ENST00000482158 ACOD1A6NK06 481 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 RENP00797 406 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 OAS1P00973 400 aaKnown RBP4.52□□□□□ -1.69
SF3B1-210ENST00000482158 GATA1P15976 413 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-210ENST00000482158 GATA2P23769 480 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-210ENST00000482158 AKT2P31751 481 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 SSTP61278 116 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 CDKL1Q00532 357 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 WASHC5Q12768 1159 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 EMC2Q15006 297 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 HKDC1Q2TB90 917 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 OR6B2Q6IFH4 312 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 EMBQ6PCB8 327 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 RFWD3Q6PCD5 774 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 REG3GQ6UW15 175 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 YRDCQ86U90 279 aaKnown RBP4.52□□□□□ -1.69
SF3B1-210ENST00000482158 ELMOD2Q8IZ81 293 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 ICA1LQ8NDH6 482 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 OR4Q3Q8NH05 313 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 FLVCR1-AS1Q8TAF5 88 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 FBXO25Q8TCJ0 367 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 RASL10AQ92737 203 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 TMEM45BQ96B21 275 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 DEFB118Q96PH6 123 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 CBWD1Q9BRT8 395 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 ST6GALNAC5Q9BVH7 336 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 DCTPP1Q9H773 170 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 HPS4Q9NQG7 708 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 NINJ2Q9NZG7 142 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 SPASTQ9UBP0 616 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 TUBGCP4Q9UGJ1 667 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 ATG4BQ9Y4P1 393 aa4.52□□□□□ -1.69
SF3B1-210ENST00000482158 CFAP73A6NFT4 308 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 ARPC1BO15143 372 aaKnown RBP4.51□□□□□ -1.69
SF3B1-210ENST00000482158 ADAM12O43184 909 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 MELTFP08582 738 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 NPY2RP49146 381 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-210ENST00000482158 GAMTQ14353 236 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 HAGHQ16775 308 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 MFSD7Q6UXD7 560 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 MIER3Q7Z3K6 550 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 TAF8Q7Z7C8 310 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 CHCHD4Q8N4Q1 142 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 SAMD12Q8N8I0 201 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 IL1RL2Q9HB29 575 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 STARD5Q9NSY2 213 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 LHX3Q9UBR4 397 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 MIOXQ9UGB7 285 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 IKZF3Q9UKT9 509 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 MGAT4AQ9UM21 535 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 ENTPD4Q9Y227 616 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 NUDCQ9Y266 331 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 CPQQ9Y646 472 aa4.51□□□□□ -1.69
SF3B1-210ENST00000482158 COL5A2P05997 1499 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-210ENST00000482158 RPGRIP1LQ68CZ1 1315 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 A0A0A6YYD4 124 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 RNF212BA8MTL3 300 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 GALR3O60755 368 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-210ENST00000482158 VENTXO95231 258 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 KRT5P13647 590 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 FOLR2P14207 255 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 BCL3P20749 454 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 PRDX6P30041 224 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 SPRP35270 261 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-210ENST00000482158 RABIFP47224 123 aa4.5□□□□□ -1.69
SF3B1-210ENST00000482158 CYLC2Q14093 348 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-210ENST00000482158 ZKSCAN8Q15776 578 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms