RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 LOC102723532A0A0G2JNH3 316 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 KRBA1A5PL33 1030 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 ZNF860A6NHJ4 632 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 CLEC3AO75596 197 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 FADS2O95864 444 aaKnown RBP13.66□□□□□ -0.22
CHD3-211ENST00000481999 GRK3P35626 688 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 FEN1P39748 380 aaKnown RBP13.66□□□□□ -0.22
CHD3-211ENST00000481999 OLR1P78380 273 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 KCNC4Q03721 635 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 FZD2Q14332 565 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 SMN1Q16637 294 aaKnown RBP13.66□□□□□ -0.22
CHD3-211ENST00000481999 FRMPD2BQ6IN97 320 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 ABHD17CQ6PCB6 329 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 CEACAM20Q6UY09 585 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 IKBIPQ70UQ0 350 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 PAGE2Q7Z2X7 111 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 CCDC71Q8IV32 467 aaPredicted RBP13.66□□□□□ -0.22
CHD3-211ENST00000481999 OR4N4Q8N0Y3 316 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 OR52J3Q8NH60 311 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 SPPL2AQ8TCT8 520 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 SLC37A2Q8TED4 501 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 OR2A14Q96R47 310 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 ZNF300Q96RE9 604 aaPredicted RBP13.66□□□□□ -0.22
CHD3-211ENST00000481999 GABARAPL3Q9BY60 117 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 AKIP1Q9NQ31 210 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 RASSF1Q9NS23 344 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 ASXL3Q9C0F0 2248 aa13.66□□□□□ -0.22
CHD3-211ENST00000481999 E9PQ18 207 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 KPNA4O00629 521 aaPredicted RBP13.65□□□□□ -0.22
CHD3-211ENST00000481999 TYRP1P17643 537 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 HIST1H1TP22492 207 aaPredicted RBP13.65□□□□□ -0.22
CHD3-211ENST00000481999 CD97P48960 835 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 BCAP31P51572 246 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 PRKAG1P54619 331 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 PCBP4P57723 403 aaKnown RBP13.65□□□□□ -0.22
CHD3-211ENST00000481999 ILF3Q12906 894 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHD3-211ENST00000481999 DGCR6Q14129 220 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 ZIC1Q15915 447 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 FBXO42Q6P3S6 717 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 PRSS41Q7RTY9 318 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 WDR53Q7Z5U6 358 aaPredicted RBP13.65□□□□□ -0.22
CHD3-211ENST00000481999 ABI3BPQ7Z7G0 1075 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 NDNFQ8TB73 568 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 ASB12Q8WXK4 309 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 HRASLS5Q96KN8 279 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 WFDC6Q9BQY6 131 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 RAB11FIP5Q9BXF6 653 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 GLIPR2Q9H4G4 154 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 POLMQ9NP87 494 aaPredicted RBP13.65□□□□□ -0.22
CHD3-211ENST00000481999 WSB2Q9NYS7 404 aaPredicted RBP13.65□□□□□ -0.22
CHD3-211ENST00000481999 OR6C2Q9NZP2 312 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 FREM2Q5SZK8 3169 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 PCDHGA12O60330 932 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 WBP4O75554 376 aaKnown RBP13.65□□□□□ -0.22
CHD3-211ENST00000481999 NADKO95544 446 aaPredicted RBP13.65□□□□□ -0.22
CHD3-211ENST00000481999 EIF2S1P05198 315 aaKnown RBP13.65□□□□□ -0.22
CHD3-211ENST00000481999 BCHEP06276 602 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 UGT2B7P16662 529 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 CMPK1P30085 196 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 BTN3A2P78410 334 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 FZD5Q13467 585 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 GPR19Q15760 415 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 DUSP7Q16829 419 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 GCNT6Q5T4J0 391 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 TRIM48Q8IWZ4 208 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 CCDC116Q8IYX3 515 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 SIMC1Q8NDZ2 872 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 CNRIP1Q96F85 164 aaPredicted RBP13.65□□□□□ -0.22
CHD3-211ENST00000481999 FAM210AQ96ND0 272 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 MAPKAP1Q9BPZ7 522 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 ORAI3Q9BRQ5 295 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 RHNO1Q9BSD3 238 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 EPS8L2Q9H6S3 715 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 STARD5Q9NSY2 213 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 RAB23Q9ULC3 237 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 MRPS2Q9Y399 296 aaKnown RBP13.65□□□□□ -0.22
CHD3-211ENST00000481999 TESMINQ9Y4I5 508 aa13.65□□□□□ -0.22
CHD3-211ENST00000481999 ADAMDEC1O15204 470 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 ZW10O43264 779 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 AIFM1O95831 613 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 ZNF888P0CJ79 500 aaPredicted RBP13.64□□□□□ -0.23
CHD3-211ENST00000481999 ATP5A1P25705 553 aaKnown RBP13.64□□□□□ -0.23
CHD3-211ENST00000481999 RRM2P31350 389 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 GSSP48637 474 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 CDK6Q00534 326 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 EEF1A2Q05639 463 aaKnown RBP13.64□□□□□ -0.23
CHD3-211ENST00000481999 TRIM16LQ309B1 348 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 KIAA0895LQ68EN5 471 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 TAF8Q7Z7C8 310 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 ADCK1Q86TW2 530 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 PAQR7Q86WK9 346 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 ZNF687Q8N1G0 1237 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 TSTD1Q8NFU3 115 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 SIGLEC11Q96RL6 698 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 FBXO8Q9NRD0 319 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 CPNE7Q9UBL6 633 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 PCOLCE2Q9UKZ9 415 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 ASB4Q9Y574 426 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 CACNA1IQ9P0X4 2223 aa13.64□□□□□ -0.23
CHD3-211ENST00000481999 PRAMEF27A3QJZ7 478 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms