RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ELAVL4P26378 380 aaKnown RBP10.57□□□□□ -0.72
CCM2-213ENST00000480658 HMOX2P30519 316 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 GMPRP36959 345 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 CCT5P48643 541 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 MAN2A2P49641 1150 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 ADORA2A-AS1P86434 159 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 ID2Q02363 134 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 FUT7Q11130 342 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 SLC10A1Q14973 349 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 CCDC153Q494R4 210 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 RNFT1Q5M7Z0 435 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 ZNF678Q5SXM1 525 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 WLSQ5T9L3 541 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 TMEM198Q66K66 360 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 SLC48A1Q6P1K1 146 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 SCIMPQ6UWF3 145 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 GPRIN3Q6ZVF9 776 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 COMMD6Q7Z4G1 85 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 PACS2Q86VP3 889 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 OR4N5Q8IXE1 308 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 VWA5B2Q8N398 1253 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 LIX1Q8N485 282 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 RDH11Q8TC12 318 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 CHTF18Q8WVB6 975 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 L3HYPDHQ96EM0 354 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 LRRC46Q96FV0 321 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 METTL2AQ96IZ6 378 aaKnown RBP10.57□□□□□ -0.72
CCM2-213ENST00000480658 PHF12Q96QT6 1004 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 SMC6Q96SB8 1091 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 DOHHQ9BU89 302 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 SORBS1Q9BX66 1292 aaKnown RBP10.57□□□□□ -0.72
CCM2-213ENST00000480658 ZBTB26Q9HCK0 441 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 ACKR4Q9NPB9 350 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 MCM8Q9UJA3 840 aa10.57□□□□□ -0.72
CCM2-213ENST00000480658 WBP11Q9Y2W2 641 aaKnown RBP10.57□□□□□ -0.72
CCM2-213ENST00000480658 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.57□□□□□ -0.72
CCM2-213ENST00000480658 NBPF19A0A087WUL8 3843 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 RHOXF2BP0C7M4 288 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 CAPN3P20807 821 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 ACVR2AP27037 513 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 COL8A1P27658 744 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 HSD17B3P37058 310 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 XKP51811 444 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 NEK2P51955 445 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 PRKAA2P54646 552 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 MRPS22P82650 360 aaKnown RBP10.56□□□□□ -0.72
CCM2-213ENST00000480658 SNTA1Q13424 505 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 TEX35Q5T0J7 233 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 TMEM81Q6P7N7 255 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 B3GNT6Q6ZMB0 384 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 MCEMP1Q8IX19 187 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 PM20D2Q8IYS1 436 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 LRRC25Q8N386 305 aaPredicted RBP10.56□□□□□ -0.72
CCM2-213ENST00000480658 FAM13CQ8NE31 585 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 OR52N2Q8NGI0 321 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 OR5M3Q8NGP4 307 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 PPWD1Q96BP3 646 aaKnown RBP10.56□□□□□ -0.72
CCM2-213ENST00000480658 KLHL29Q96CT2 875 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 HSPBAP1Q96EW2 488 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 C14orf79Q96F83 325 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 MRPL1Q9BYD6 325 aaKnown RBP10.56□□□□□ -0.72
CCM2-213ENST00000480658 OR10A5Q9H207 317 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 EXO5Q9H790 373 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 ZNF703Q9H7S9 590 aaPredicted RBP10.56□□□□□ -0.72
CCM2-213ENST00000480658 HHATLQ9HCP6 504 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 SH2D2AQ9NP31 389 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 DEPPQ9NTK1 212 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 TEX10Q9NXF1 929 aaPredicted RBP10.56□□□□□ -0.72
CCM2-213ENST00000480658 EHD3Q9NZN3 535 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 PCDHA9Q9Y5H5 950 aa10.56□□□□□ -0.72
CCM2-213ENST00000480658 CROCCQ5TZA2 2017 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 TRGV5A0A0B4J1U4 118 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 SERTM1A2A2V5 107 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 LRRC14BA6NHZ5 514 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 GLOD5A6NK44 160 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 FAM166BA8MTA8 275 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 CRCPO75575 148 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 ESRRBO95718 433 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 PDYNP01213 254 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 CCL3P10147 92 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 MYL2P10916 166 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 DDX5P17844 614 aaKnown RBP10.55□□□□□ -0.72
CCM2-213ENST00000480658 NT5EP21589 574 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 TNFRSF8P28908 595 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 RFC3P40938 356 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 MAGEA5P43359 124 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 MASP1P48740 699 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 HSF1Q00613 529 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 ACSM2AQ08AH3 577 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 MAP4K2Q12851 820 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 SLC29A2Q14542 456 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 ERCC6LQ2NKX8 1250 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 ZNF750Q32MQ0 723 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 ACSM2BQ68CK6 577 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 HIST2H2BCQ6DN03 193 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 LETMD1Q6P1Q0 360 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 TRILQ7L0X0 811 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 CHERPQ8IWX8 916 aaKnown RBP10.55□□□□□ -0.72
CCM2-213ENST00000480658 CLYBLQ8N0X4 340 aa10.55□□□□□ -0.72
CCM2-213ENST00000480658 RNF175Q8N4F7 328 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms