RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 FUT7Q11130 342 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 MFAP5Q13361 173 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 LY6DQ14210 128 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 PRSS53Q2L4Q9 553 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 SIRT6Q8N6T7 355 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 CEP70Q8NHQ1 597 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 TM9SF4Q92544 642 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 GFM2Q969S9 779 aaKnown RBP18.37■□□□□ 0.53
LIME1-205ENST00000480139 CTHRC1Q96CG8 243 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 ZNF354BQ96LW1 612 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 DEFB126Q9BYW3 111 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 AIG1Q9NVV5 245 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 MAT2BQ9NZL9 334 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 PTGFRNQ9P2B2 879 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 CHD6Q8TD26 2715 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 OR6C76A6NM76 312 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 GABRR3A8MPY1 467 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 DIAPH2O60879 1101 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 ZFAND5O76080 213 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 PDGFAP04085 211 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 IFI6P09912 130 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 ALDOCP09972 364 aaKnown RBP18.36■□□□□ 0.53
LIME1-205ENST00000480139 FRKP42685 505 aaPredicted RBP18.36■□□□□ 0.53
LIME1-205ENST00000480139 MGAT2Q10469 447 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 ZNF267Q14586 743 aaPredicted RBP18.36■□□□□ 0.53
LIME1-205ENST00000480139 FAM208BQ5VWN6 2430 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 FAM180BQ6P0A1 224 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 HSDL2Q6YN16 418 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 CAMKMTQ7Z624 323 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 CCDC116Q8IYX3 515 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 VWA5B2Q8N398 1253 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 NATD1Q8N6N6 113 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 ZNF321PQ8N8H1 164 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 OR7G1Q8NGA0 311 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 OR52B2Q96RD2 323 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 BBS4Q96RK4 519 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 PRPF18Q99633 342 aaKnown RBP18.36■□□□□ 0.53
LIME1-205ENST00000480139 CNPPD1Q9BV87 410 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 BRINP2Q9C0B6 783 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 RNF32Q9H0A6 362 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 EPS8L2Q9H6S3 715 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 ZNF639Q9UID6 485 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 ERVK-19Q9WJR5 959 aa18.36■□□□□ 0.53
LIME1-205ENST00000480139 TNRC6AQ8NDV7 1962 aaKnown RBP18.35■□□□□ 0.53
LIME1-205ENST00000480139 A8MUI8 341 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 K7EM74 188 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 HRKO00198 91 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 ANKRD28O15084 1053 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 PDPK1O15530 556 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 CT62P0C5K7 136 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 S1PR1P21453 382 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 IDH3AP50213 366 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 AQP5P55064 265 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 SLC37A1P57057 533 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 MEP1AQ16819 746 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 LSM12Q3MHD2 195 aaKnown RBP18.35■□□□□ 0.53
LIME1-205ENST00000480139 ZNF385BQ569K4 471 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 ZNF628Q5EBL2 1059 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 ACER2Q5QJU3 275 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 ABHD17BQ5VST6 288 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 NXNQ6DKJ4 435 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 ASB18Q6ZVZ8 466 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 ACAD11Q709F0 780 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 COQ8BQ96D53 544 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 AMDHD1Q96NU7 426 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 NPAS2Q99743 824 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 CCDC28BQ9BUN5 200 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 ACSS1Q9NUB1 689 aaPredicted RBP18.35■□□□□ 0.53
LIME1-205ENST00000480139 RYDENQ9NUL5 291 aaKnown RBP18.35■□□□□ 0.53
LIME1-205ENST00000480139 ATAD3AQ9NVI7 634 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 SH3BP4Q9P0V3 963 aa18.35■□□□□ 0.53
LIME1-205ENST00000480139 TLN1Q9Y490 2541 aaKnown RBP18.35■□□□□ 0.53
LIME1-205ENST00000480139 POLR3GO15318 223 aaPredicted RBP18.34■□□□□ 0.53
LIME1-205ENST00000480139 CLPSP04118 112 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 IDO1P14902 403 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 SOX18P35713 384 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 NCBP2P52298 156 aaKnown RBP eCLIP18.34■□□□□ 0.532e-18■■□□□ 12.4
LIME1-205ENST00000480139 MLF1P58340 268 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 RNF4P78317 190 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 MLC1Q15049 377 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 LTB4RQ15722 352 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 GSTA3Q16772 222 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 MPEG1Q2M385 716 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 B3GNTL1Q67FW5 361 aaPredicted RBP18.34■□□□□ 0.53
LIME1-205ENST00000480139 ANKRD26P1Q6NSI1 321 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 RNF111Q6ZNA4 994 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 RPS19BP1Q86WX3 136 aaKnown RBP18.34■□□□□ 0.53
LIME1-205ENST00000480139 KRTCAP2Q8N6L1 136 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 ZNF615Q8N8J6 731 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 OR5L2Q8NGL0 311 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 OR9A2Q8NGT5 310 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 ZFP28Q8NHY6 868 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 NUBPLQ8TB37 319 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 TESCQ96BS2 214 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 ZBED6CLQ96FA7 236 aaPredicted RBP18.34■□□□□ 0.53
LIME1-205ENST00000480139 DPY30Q9C005 99 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 GLIPR2Q9H4G4 154 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 SLAMF7Q9NQ25 335 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 TCF7L2Q9NQB0 619 aa18.34■□□□□ 0.53
LIME1-205ENST00000480139 GPR45Q9Y5Y3 372 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms