RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 FAM47EQ6ZV65 393 aa23.27■■□□□ 1.32
PERM1-203ENST00000479361 SPATA19Q7Z5L4 167 aa23.27■■□□□ 1.32
PERM1-203ENST00000479361 CCDC116Q8IYX3 515 aa23.27■■□□□ 1.32
PERM1-203ENST00000479361 VWA5B2Q8N398 1253 aa23.27■■□□□ 1.32
PERM1-203ENST00000479361 OR5L2Q8NGL0 311 aa23.27■■□□□ 1.32
PERM1-203ENST00000479361 BRINP2Q9C0B6 783 aa23.27■■□□□ 1.32
PERM1-203ENST00000479361 WDR55Q9H6Y2 383 aaPredicted RBP23.27■■□□□ 1.32
PERM1-203ENST00000479361 ZNF223Q9UK11 482 aaPredicted RBP23.27■■□□□ 1.32
PERM1-203ENST00000479361 BOD1L1Q8NFC6 3051 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 MAP4K2Q12851 820 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 PDE7AQ13946 482 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 PRICKLE4Q2TBC4 344 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 FCRLBQ6BAA4 426 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 NXNQ6DKJ4 435 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 RNF111Q6ZNA4 994 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 ARMC10Q8N2F6 343 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 ZNF321PQ8N8H1 164 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 TEX19Q8NA77 164 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 OR7G1Q8NGA0 311 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 MAELQ96JY0 434 aaKnown RBP23.26■■□□□ 1.31
PERM1-203ENST00000479361 PRPF18Q99633 342 aaKnown RBP23.26■■□□□ 1.31
PERM1-203ENST00000479361 RNF32Q9H0A6 362 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 CDCP1Q9H5V8 836 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 ZBTB20Q9HC78 741 aaPredicted RBP23.26■■□□□ 1.31
PERM1-203ENST00000479361 SH3BP4Q9P0V3 963 aa23.26■■□□□ 1.31
PERM1-203ENST00000479361 GOLGA8QA0A0J9YX86 632 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 GOLGA8OA6NCC3 632 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 OR6C76A6NM76 312 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 MYO1GB0I1T2 1018 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 GOLGA8NF8WBI6 632 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 HRKO00198 91 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 CDK2AP1O14519 115 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 FCHO1O14526 889 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 ZNF195O14628 629 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 SCAMP2O15127 329 aaKnown RBP23.25■■□□□ 1.31
PERM1-203ENST00000479361 DIAPH2O60879 1101 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 RNF4P78317 190 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 DUSP2Q05923 314 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 FUT7Q11130 342 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 MAVSQ7Z434 540 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 ZNF675Q8TD23 568 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 ACTRT2Q8TDY3 377 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 DOK4Q8TEW6 326 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 MAT2BQ9NZL9 334 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 ATP6V1HQ9UI12 483 aa23.25■■□□□ 1.31
PERM1-203ENST00000479361 RALYQ9UKM9 306 aaKnown RBP23.25■■□□□ 1.31
PERM1-203ENST00000479361 ATRXP46100 2492 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 GABRR3A8MPY1 467 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 TCP11X1B4DZS4 312 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 PDPK1O15530 556 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 SLITRK5O94991 958 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 CT62P0C5K7 136 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 NCBP2P52298 156 aaKnown RBP eCLIP23.24■■□□□ 1.31
PERM1-203ENST00000479361 DIO3P55073 304 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 CLDN8P56748 225 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 SLC37A1P57057 533 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 MLF1P58340 268 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 C21orf58P58505 322 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 ARG2P78540 354 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 KLRB1Q12918 225 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 NFATC3Q12968 1075 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 SLC9B1Q4ZJI4 515 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 ANKRD26P1Q6NSI1 321 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 SLC29A4Q7RTT9 530 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 BEST3Q8N1M1 668 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 ADCY4Q8NFM4 1077 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 CEP70Q8NHQ1 597 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 SUN3Q8TAQ9 357 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 THAP3Q8WTV1 239 aaPredicted RBP23.24■■□□□ 1.31
PERM1-203ENST00000479361 HAS2Q92819 552 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 ERP27Q96DN0 273 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 ATAD3AQ9NVI7 634 aa23.24■■□□□ 1.31
PERM1-203ENST00000479361 SSTR4P31391 388 aa23.23■■□□□ 1.31
PERM1-203ENST00000479361 LTB4RQ15722 352 aa23.23■■□□□ 1.31
PERM1-203ENST00000479361 PRSS53Q2L4Q9 553 aa23.23■■□□□ 1.31
PERM1-203ENST00000479361 EPGNQ6UW88 154 aa23.23■■□□□ 1.31
PERM1-203ENST00000479361 ACAD11Q709F0 780 aa23.23■■□□□ 1.31
PERM1-203ENST00000479361 NATD1Q8N6N6 113 aa23.23■■□□□ 1.31
PERM1-203ENST00000479361 OR9A2Q8NGT5 310 aa23.23■■□□□ 1.31
PERM1-203ENST00000479361 ZFP28Q8NHY6 868 aa23.23■■□□□ 1.31
PERM1-203ENST00000479361 NUBPLQ8TB37 319 aa23.23■■□□□ 1.31
PERM1-203ENST00000479361 CTHRC1Q96CG8 243 aa23.23■■□□□ 1.31
PERM1-203ENST00000479361 ZBED6CLQ96FA7 236 aaPredicted RBP23.23■■□□□ 1.31
PERM1-203ENST00000479361 AMDHD1Q96NU7 426 aa23.23■■□□□ 1.31
PERM1-203ENST00000479361 NPAS2Q99743 824 aa23.23■■□□□ 1.31
PERM1-203ENST00000479361 MYOTQ9UBF9 498 aa23.23■■□□□ 1.31
PERM1-203ENST00000479361 TLN1Q9Y490 2541 aaKnown RBP23.23■■□□□ 1.31
PERM1-203ENST00000479361 PRKNO60260 465 aaPredicted RBP23.22■■□□□ 1.31
PERM1-203ENST00000479361 EDF1O60869 148 aaKnown RBP23.22■■□□□ 1.31
PERM1-203ENST00000479361 BCAS2O75934 225 aaPredicted RBP23.22■■□□□ 1.31
PERM1-203ENST00000479361 WDPCPO95876 746 aa23.22■■□□□ 1.31
PERM1-203ENST00000479361 CASRP41180 1078 aa23.22■■□□□ 1.31
PERM1-203ENST00000479361 MGAT2Q10469 447 aa23.22■■□□□ 1.31
PERM1-203ENST00000479361 ZNF628Q5EBL2 1059 aa23.22■■□□□ 1.31
PERM1-203ENST00000479361 CPTPQ5TA50 214 aa23.22■■□□□ 1.31
PERM1-203ENST00000479361 FAM111BQ6SJ93 734 aa23.22■■□□□ 1.31
PERM1-203ENST00000479361 PTRH1Q86Y79 214 aaKnown RBP23.22■■□□□ 1.31
PERM1-203ENST00000479361 RIMKLAQ8IXN7 391 aa23.22■■□□□ 1.31
PERM1-203ENST00000479361 C9orf40Q8IXQ3 194 aa23.22■■□□□ 1.31
PERM1-203ENST00000479361 RBMXL3Q8N7X1 1067 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms