RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 RBMS1P29558 406 aaKnown RBP4.32□□□□□ -1.72
RFC4-212ENST00000479307 OR3A1P47881 315 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 KHKP50053 298 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 NR0B1P51843 470 aaKnown RBP4.32□□□□□ -1.72
RFC4-212ENST00000479307 AKAP17AQ02040 695 aaKnown RBP4.32□□□□□ -1.72
RFC4-212ENST00000479307 EFTUD2Q15029 972 aaKnown RBP eCLIP4.32□□□□□ -1.722e-6■■□□□ 13.5
RFC4-212ENST00000479307 PPA1Q15181 289 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 SF3A2Q15428 464 aaKnown RBP4.32□□□□□ -1.72
RFC4-212ENST00000479307 LRRC38Q5VT99 294 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 PPTC7Q8NI37 304 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 ATP6V0A1Q93050 837 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 GMPPAQ96IJ6 420 aaPredicted RBP4.32□□□□□ -1.72
RFC4-212ENST00000479307 RBM41Q96IZ5 413 aaKnown RBP4.32□□□□□ -1.72
RFC4-212ENST00000479307 MAGED4Q96JG8 741 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 PRAC1Q96KF2 57 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 LITAFQ99732 161 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 ALKBH7Q9BT30 221 aaPredicted RBP4.32□□□□□ -1.72
RFC4-212ENST00000479307 WDR13Q9H1Z4 485 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 EGLN3Q9H6Z9 239 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 RPF1Q9H9Y2 349 aaKnown RBP4.32□□□□□ -1.72
RFC4-212ENST00000479307 PANK4Q9NVE7 773 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 ATAD3AQ9NVI7 634 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 NYAP2Q9P242 653 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 KLK13Q9UKR3 277 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 ITM2BQ9Y287 266 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 MTF2Q9Y483 593 aaPredicted RBP4.32□□□□□ -1.72
RFC4-212ENST00000479307 CSMD1Q96PZ7 3565 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 ABCA12Q86UK0 2595 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 COL4A2P08572 1712 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 ACACAQ13085 2346 aa4.32□□□□□ -1.72
RFC4-212ENST00000479307 APC2O95996 2303 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 CRCPO75575 148 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 GLCEO94923 617 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 CHRNA1P02708 482 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 GHRP10912 638 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 VDRP11473 427 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 ATP6V1B1P15313 513 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 CSRP1P21291 193 aaKnown RBP4.31□□□□□ -1.72
RFC4-212ENST00000479307 AADACP22760 399 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 MT3P25713 68 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 OR3A2P47893 321 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 LEPRP48357 1165 aaKnown RBP4.31□□□□□ -1.72
RFC4-212ENST00000479307 DCDC1P59894 354 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 SNRPD1P62314 119 aaKnown RBP4.31□□□□□ -1.72
RFC4-212ENST00000479307 RPP38P78345 283 aaKnown RBP4.31□□□□□ -1.72
RFC4-212ENST00000479307 MGAT3Q09327 533 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 RCN2Q14257 317 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 SMC1AQ14683 1233 aaKnown RBP4.31□□□□□ -1.72
RFC4-212ENST00000479307 MLF2Q15773 248 aaPredicted RBP4.31□□□□□ -1.72
RFC4-212ENST00000479307 SGSM1Q2NKQ1 1148 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 ARHGAP11AQ6P4F7 1023 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 PODNL1Q6PEZ8 512 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 BTN2A1Q7KYR7 527 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 KLHDC8AQ8IYD2 350 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 OTUD6BQ8N6M0 293 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 MRPL43Q8N983 215 aaKnown RBP4.31□□□□□ -1.72
RFC4-212ENST00000479307 COLGALT1Q8NBJ5 622 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 GMCL1P1Q8NEA9 526 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 OR5T2Q8NGG2 359 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 MAPK15Q8TD08 544 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 AZIN2Q96A70 460 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 RASL10BQ96S79 203 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 PI4K2AQ9BTU6 479 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 BARHL1Q9BZE3 327 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 MTRRQ9UBK8 725 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 HBS1LQ9Y450 684 aaKnown RBP4.31□□□□□ -1.72
RFC4-212ENST00000479307 MYH7P12883 1935 aa4.31□□□□□ -1.72
RFC4-212ENST00000479307 KIF26AQ9ULI4 1882 aaPredicted RBP4.3□□□□□ -1.72
RFC4-212ENST00000479307 SPENQ96T58 3664 aaKnown RBP4.3□□□□□ -1.72
RFC4-212ENST00000479307 IGKV6D-41A0A0C4DH26 115 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 MTMR11A4FU01 709 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 E5RGE8 158 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 ANHXE9PGG2 379 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 H3BMM5 538 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 PGRMC2O15173 223 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 TTI1O43156 1089 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 CYTIPO60759 359 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 ATP9AO75110 1047 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 IDH1O75874 414 aaKnown RBP4.3□□□□□ -1.72
RFC4-212ENST00000479307 CFC1BP0CG36 223 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 CFC1P0CG37 223 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 SMIM10L2AP0DMW4 78 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 SMIM10L2BP0DMW5 78 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 DLATP10515 647 aaKnown RBP4.3□□□□□ -1.72
RFC4-212ENST00000479307 UROSP10746 265 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 OAS2P29728 719 aaKnown RBP4.3□□□□□ -1.72
RFC4-212ENST00000479307 PAX9P55771 341 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 OR1D5P58170 312 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 HTR4Q13639 388 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 HNRNPDQ14103 355 aaKnown RBP4.3□□□□□ -1.72
RFC4-212ENST00000479307 TAB1Q15750 504 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 ARMCX4Q5H9R4 360 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 ADAMTSL4-AS1Q5T5F5 129 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 MACC1Q6ZN28 852 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 Q6ZSR9 355 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 NOTCH2NLQ7Z3S9 236 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 COX8CQ7Z4L0 72 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 HOGA1Q86XE5 327 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 EGFL6Q8IUX8 553 aa4.3□□□□□ -1.72
RFC4-212ENST00000479307 TMEM99Q8N816 258 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms