RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 FAIM2Q9BWQ8 316 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 CDADC1Q9BWV3 514 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 SPRTNQ9H040 489 aaPredicted RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 REEP4Q9H6H4 257 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 ACTR5Q9H9F9 607 aaPredicted RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 FANCEQ9HB96 536 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 LYRM4Q9HD34 91 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 SERHLQ9NQF3 203 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 FGF21Q9NSA1 209 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 IRAK4Q9NWZ3 460 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 FAM120CQ9NX05 1096 aaKnown RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 EHD3Q9NZN3 535 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 KCMF1Q9P0J7 381 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 PHF11Q9UIL8 331 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 LEF1Q9UJU2 399 aaPredicted RBP6.27□□□□□ -1.41
USP48-208ENST00000479177 MAN2B2Q9Y2E5 1009 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 NDUFAF1Q9Y375 327 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 NAALAD2Q9Y3Q0 740 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 ATG4BQ9Y4P1 393 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 NEUROG3Q9Y4Z2 214 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 PCDHA9Q9Y5H5 950 aa6.27□□□□□ -1.41
USP48-208ENST00000479177 NUP210LQ5VU65 1888 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 TRBV5-3A0A0A0MS03 114 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 A0A0A6YYC8 382 aaPredicted RBP6.26□□□□□ -1.41
USP48-208ENST00000479177 A0A1W2PR48 441 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 GABRR3A8MPY1 467 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 I3L1I5 382 aaPredicted RBP6.26□□□□□ -1.41
USP48-208ENST00000479177 SGK494L7N484 410 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 ZNF749O43361 778 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 SCN2BO60939 215 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 DNAJB6O75190 326 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 GUCY1B2O75343 617 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 PRKRAO75569 313 aaKnown RBP6.26□□□□□ -1.41
USP48-208ENST00000479177 DNAJC8O75937 253 aaPredicted RBP6.26□□□□□ -1.41
USP48-208ENST00000479177 HOXB9P17482 250 aaPredicted RBP6.26□□□□□ -1.41
USP48-208ENST00000479177 PTPN6P29350 595 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 ALDH9A1P49189 494 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 RASSF2P50749 326 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 HNRNPFP52597 415 aaKnown RBP6.26□□□□□ -1.41
USP48-208ENST00000479177 LIM2P55344 173 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 RAB38P57729 211 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 SKP1P63208 163 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 OLR1P78380 273 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 MXRA7P84157 204 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 SHC2P98077 582 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 SLC25A3Q00325 362 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 E2F1Q01094 437 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 FOXM1Q08050 763 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 C2orf80Q0P641 193 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 FAM53BQ14153 422 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 HEPACAMQ14CZ8 416 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 PRSS53Q2L4Q9 553 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 MPEG1Q2M385 716 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 MUM1Q2TAK8 710 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 PGS1Q32NB8 556 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 MMEL1Q495T6 779 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 DNAL1Q4LDG9 190 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 PAGE3Q5JUK9 113 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 CPTPQ5TA50 214 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 NDUFAF5Q5TEU4 345 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 YOD1Q5VVQ6 348 aaPredicted RBP6.26□□□□□ -1.41
USP48-208ENST00000479177 C18orf63Q68DL7 685 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 OR4F3Q6IEY1 312 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 NIPAL1Q6NVV3 410 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 C8orf82Q6P1X6 216 aaPredicted RBP6.26□□□□□ -1.41
USP48-208ENST00000479177 TLDC1Q6P9B6 456 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 VHLLQ6RSH7 139 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 ASCL5Q7RTU5 278 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 DHDDSQ86SQ9 333 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 GLRX5Q86SX6 157 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 GPR180Q86V85 440 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 TICAM1Q8IUC6 712 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 GPR135Q8IZ08 494 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 DSELQ8IZU8 1212 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 CA13Q8N1Q1 262 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 KIF2BQ8N4N8 673 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 BMPERQ8N8U9 685 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 FAM47BQ8NA70 645 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 TMEM52Q8NDY8 209 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 OR5T3Q8NGG3 340 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 OR9A4Q8NGU2 314 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 GTF2H4Q92759 462 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 ROPN1LQ96C74 230 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 CCDC115Q96NT0 180 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 OR52E6Q96RD3 313 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 DIRC2Q96SL1 478 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 CSF3RQ99062 836 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 PRPF18Q99633 342 aaKnown RBP6.26□□□□□ -1.41
USP48-208ENST00000479177 BTBD10Q9BSF8 475 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 DUSP26Q9BV47 211 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 NPLQ9BXD5 320 aaPredicted RBP6.26□□□□□ -1.41
USP48-208ENST00000479177 C1orf21Q9H246 121 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 EFCAB1Q9HAE3 211 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 ANKHQ9HCJ1 492 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 MIEF1Q9NQG6 463 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 CUTCQ9NTM9 273 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 ATAD3AQ9NVI7 634 aa6.26□□□□□ -1.41
USP48-208ENST00000479177 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.26□□□□□ -1.41
USP48-208ENST00000479177 ERVK13-1Q9NX77 482 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms